RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 GALR2O43603 387 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST1H2BKO60814 126 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST1H2BJP06899 126 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST1H2BOP23527 126 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST1H2BBP33778 126 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 IER3P46695 156 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST1H2BDP58876 126 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST1H2BCP62807 126 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST2H2BEQ16778 126 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-211ENST00000513346 TMEM52Q8NDY8 209 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 ZNRF4Q8WWF5 429 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST1H2BHQ93079 126 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 ABHD14BQ96IU4 210 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST1H2BNQ99877 126 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 HIST1H2BMQ99879 126 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 TINAGQ9UJW2 476 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 IL3RAP26951 378 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 BTNL3Q6UXE8 466 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 C1QL4Q86Z23 238 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 TDRD6O60522 2096 aaKnown RBP9.81□□□□□ -0.84
TCOF1-211ENST00000513346 LMX1BO60663 402 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 RAMP1O60894 148 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 GTF3AQ92664 365 aaKnown RBP9.81□□□□□ -0.84
TCOF1-211ENST00000513346 ADIPOR1Q96A54 375 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 TPPP3Q9BW30 176 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 WDR61Q9GZS3 305 aaKnown RBP9.81□□□□□ -0.84
TCOF1-211ENST00000513346 CCL28Q9NRJ3 127 aa9.81□□□□□ -0.84
TCOF1-211ENST00000513346 GNG10P50151 68 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 MEOX1P50221 254 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 TNFRSF9Q07011 255 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 SPATA45Q537H7 98 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 PYY3Q5JQD4 70 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 VASH2Q86V25 355 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 SPOCK3Q9BQ16 436 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 RSG1Q9BU20 258 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 SARGQ9BW04 601 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 TMEM191AQ9H0A3 160 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 AURKAIP1Q9NWT8 199 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-211ENST00000513346 A0A1W2PQD3 144 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 H0YIZ8 118 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 GPR12P47775 334 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 HINT1P49773 126 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-211ENST00000513346 JOSD1Q15040 202 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-211ENST00000513346 WIPI2Q9Y4P8 454 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 FCGR3AP08637 254 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 PNLIPP16233 465 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 SLC35E1Q96K37 410 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 GPR27Q9NS67 375 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 TCFL5Q9UL49 500 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 DOCK8Q8NF50 2099 aa9.8□□□□□ -0.84
TCOF1-211ENST00000513346 TMEM14DPA8MWL7 114 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 GPM6AP51674 278 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 MOB1BQ7L9L4 216 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 OR52M1Q8NGK5 317 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 OR6X1Q8NH79 312 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 CT55Q8WUE5 264 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 SLC7A10Q9NS82 523 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 PPP1R14DQ9NXH3 145 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 FOXJ2Q9P0K8 574 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 DTX4Q9Y2E6 619 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 IGLV1-36A0A0B4J1U3 117 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 A0A1W2PPE3 182 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 DXOO77932 396 aaKnown RBP9.79□□□□□ -0.84
TCOF1-211ENST00000513346 RHOBP62745 196 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 WASHC3Q9Y3C0 194 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 CT45A6P0DMU7 189 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 CT45A5P0DMU8 189 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 CT45A7P0DMV0 189 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 LSM6P62312 80 aaKnown RBP9.79□□□□□ -0.84
TCOF1-211ENST00000513346 RAC1P63000 192 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 HES1Q14469 280 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 PLPPR5Q32ZL2 321 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 CT45A1Q5HYN5 189 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 CT45A3Q8NHU0 189 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 GALMQ96C23 342 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 C14orf144Q96I85 54 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 GFI1Q99684 422 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 E9PQ18 207 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 OR5G3P0C626 314 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 SRD5A2P31213 254 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 RPL24P83731 157 aaKnown RBP9.79□□□□□ -0.84
TCOF1-211ENST00000513346 CXorf66Q5JRM2 361 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-211ENST00000513346 GMPPAQ96IJ6 420 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-211ENST00000513346 WFIKKN1Q96NZ8 548 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 RASL10BQ96S79 203 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 C2orf88Q9BSF0 95 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 TMEM222Q9H0R3 208 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 DNAJC4Q9NNZ3 241 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF355PQ9NSJ1 428 aa9.79□□□□□ -0.84
TCOF1-211ENST00000513346 A0A1W2PR80 420 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 C4orf51C9J302 202 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 ADCYAP1P18509 176 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 NUTF2P61970 127 aaKnown RBP9.78□□□□□ -0.84
TCOF1-211ENST00000513346 COL10A1Q03692 680 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 OR4A47Q6IF82 309 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 HIST3H2BBQ8N257 126 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 APOBEC3DQ96AK3 386 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-211ENST00000513346 RNF122Q9H9V4 155 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms