RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 RRADP55042 308 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 TMEM50BP56557 158 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 PIGPP57054 158 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 PLP1P60201 277 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 HSD52Q0P140 79 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 MLF2Q15773 248 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-208ENST00000511604 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.29□□□□□ -1.4
CPNE4-208ENST00000511604 RNFT1Q5M7Z0 435 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 C12orf54Q6X4T0 127 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 PRSS41Q7RTY9 318 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 SGMS2Q8NHU3 365 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 KCNG3Q8TAE7 436 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 MRAP2Q96G30 205 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 GPX7Q96SL4 187 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-208ENST00000511604 PHF7Q9BWX1 381 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-208ENST00000511604 VN1R3Q9BXE9 311 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 FOXQ1Q9C009 403 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 MRPL18Q9H0U6 180 aaKnown RBP6.29□□□□□ -1.4
CPNE4-208ENST00000511604 BANF2Q9H503 90 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 VSIRQ9H7M9 311 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 MOB1AQ9H8S9 216 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 RNF186Q9NXI6 227 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 FBLN5Q9UBX5 448 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 CCL26Q9Y258 94 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 POLR1DQ9Y2S0 133 aa6.29□□□□□ -1.4
CPNE4-208ENST00000511604 DOCK11Q5JSL3 2073 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 LOC107986453A0A1B0GWG9 222 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 HRKO00198 91 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 CLEC3AO75596 197 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 BRI3O95415 125 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 REG1AP05451 166 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 ZNF728P0DKX0 622 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 ZNF20P17024 532 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 RPS4XP62701 263 aaKnown RBP6.28□□□□□ -1.4
CPNE4-208ENST00000511604 FKBP1BP68106 108 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 IGFBP7Q16270 282 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 TSPO2Q5TGU0 170 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 ZNF776Q68DI1 518 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-208ENST00000511604 LIAT1Q6ZQX7 453 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 HAPLN4Q86UW8 402 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 ODF3L1Q8IXM7 274 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 SLC22A24Q8N4F4 322 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 OR10V1Q8NGI7 309 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 KLHDC7BQ96G42 594 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 ARHGAP5-AS1Q96IT6 56 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 KCNS1Q96KK3 526 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 FER1L6-AS2Q96M78 137 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 PECRQ9BY49 303 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 NAA60Q9H7X0 242 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 TP73-AS1Q9UF72 201 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 HCFC2Q9Y5Z7 792 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 SELENOKQ9Y6D0 94 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 SNRNP200O75643 2136 aaKnown RBP6.28□□□□□ -1.4
CPNE4-208ENST00000511604 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.28□□□□□ -1.4
CPNE4-208ENST00000511604 HIDE1A8MVS5 230 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 MLNRO43193 412 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 SSSCA1O60232 199 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 MPIG6BO95866 241 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 CA2P00918 260 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 HLA-DQA2P01906 255 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 PEBP1P30086 187 aaKnown RBP6.28□□□□□ -1.4
CPNE4-208ENST00000511604 GPR1P46091 355 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 ACSF3Q4G176 576 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-208ENST00000511604 FHL5Q5TD97 284 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 LCN12Q6JVE5 192 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 ZNF788Q6ZQV5 615 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 FAM58AQ8N1B3 248 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 LRRC25Q8N386 305 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-208ENST00000511604 LRRC75AQ8NAA5 344 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 OR5A2Q8NGI9 324 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 GNB4Q9HAV0 340 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 HIF1ANQ9NWT6 349 aa6.28□□□□□ -1.4
CPNE4-208ENST00000511604 SAA2-SAA4A0A096LPE2 208 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 A0A1W2PS18 150 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 FAM231BA6NCW3 169 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 H0YJW9 148 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 ZNF324O75467 553 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-208ENST00000511604 CGAP01215 116 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 HNRNPA1P09651 372 aaKnown RBP eCLIP6.27□□□□□ -1.41
CPNE4-208ENST00000511604 STAG3L2P0CL84 134 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 FUT6P51993 359 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 PRDX1Q06830 199 aaKnown RBP6.27□□□□□ -1.41
CPNE4-208ENST00000511604 TESK1Q15569 626 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 CEACAM21Q3KPI0 293 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 ITPRIPL2Q3MIP1 535 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 C19orf35Q6ZS72 473 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 SUMF1Q8NBK3 374 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 OR4A5Q8NH83 315 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 RTN4IP1Q8WWV3 396 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-208ENST00000511604 MSI2Q96DH6 328 aaKnown RBP6.27□□□□□ -1.41
CPNE4-208ENST00000511604 FAM110AQ9BQ89 295 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 PSMG3Q9BT73 122 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-208ENST00000511604 CLEC7AQ9BXN2 247 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 RTN4RQ9BZR6 473 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 LIME1Q9H400 295 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 FNDC4Q9H6D8 234 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-208ENST00000511604 ZNF286AQ9HBT8 521 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 DECR2Q9NUI1 292 aa6.27□□□□□ -1.41
CPNE4-208ENST00000511604 THAP10Q9P2Z0 257 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms