RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 OR1N2Q8NGR9 330 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 OR2T29Q8NH02 315 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 OR56B4Q8NH76 319 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 DNAJC9Q8WXX5 260 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 SLAMF9Q96A28 289 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 EME1Q96AY2 570 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 SPSB1Q96BD6 273 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 COQ2Q96H96 371 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 DUX3Q96PT4 197 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 NR1H4Q96RI1 486 aaPredicted RBP3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 S1PR3Q99500 378 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 NIPSNAP1Q9BPW8 284 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 OSBPL10Q9BXB5 764 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 TEX12Q9BXU0 123 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 CHST6Q9GZX3 395 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 REEP1Q9H902 201 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 SLC25A19Q9HC21 320 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 EXOSC4Q9NPD3 245 aaKnown RBP3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 ISYNA1Q9NPH2 558 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 FGFR1OP2Q9NVK5 253 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 NDE1Q9NXR1 346 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 IDI2-AS1Q9NZ38 188 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 ACTR3BQ9P1U1 418 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 KIAA1456Q9P272 454 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 MRPS28Q9Y2Q9 187 aaKnown RBP3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 U3KQV3 271 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 KMT2AQ03164 3969 aa3.34□□□□□ -1.87
CALCOCO2-213ENST00000509112 IGHV1-3A0A0C4DH29 117 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 FAM230AA0A1W2PPH8 454 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 MAGEA13PA6NCF6 341 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 CCDC182A6NF36 153 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 TRIM64CA6NLI5 447 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 PRR32B1ATL7 298 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 H3BN98 237 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 SLC33A1O00400 549 aaPredicted RBP3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 HSD17B6O14756 317 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 SYT7O43581 403 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 SULT1C4O75897 302 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 MOSP00540 346 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 IGLV1-51P01701 117 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 RPSAP08865 295 aaKnown RBP3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 UBCP0CG48 685 aaKnown RBP3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 IGHV4-30-4P0DP06 118 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 DBTP11182 482 aaKnown RBP3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 PRKACAP17612 351 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 BCL3P20749 454 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 TNFSF8P32971 234 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 SOX6P35712 828 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 NPBWR2P48146 333 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 POU3F4P49335 361 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 MNAT1P51948 309 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 ZP1P60852 638 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 AESQ08117 197 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 APOFQ13790 326 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 KLF9Q13886 244 aaPredicted RBP3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 HES1Q14469 280 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 GINS1Q14691 196 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 TMEM30BQ3MIR4 351 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 KRBOX4Q5JUW0 171 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 SERTAD4-AS1Q5TG53 156 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 ELP2Q6IA86 826 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 Q6P435 159 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 ZNF322Q6U7Q0 402 aaPredicted RBP3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 SATL1Q86VE3 508 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 CATSPERDQ86XM0 798 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 SGPP2Q8IWX5 399 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 ARHGAP24Q8N264 748 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 TCTEX1D1Q8N7M0 179 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 MINDY2Q8NBR6 621 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 TRMT10AQ8TBZ6 339 aaKnown RBP3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 GIPC3Q8TF64 312 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 DCUN1D4Q92564 292 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 SNAPC3Q92966 411 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 ST6GALNAC6Q969X2 333 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 TMEM106AQ96A25 262 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 RNF183Q96D59 192 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 KCTD7Q96MP8 289 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 FEVQ99581 238 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 RASL11BQ9BPW5 248 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 PLEKHA1Q9HB21 404 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 NEK6Q9HC98 313 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 RBFOX1Q9NWB1 397 aaKnown RBP3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 CLN6Q9NWW5 311 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 CALYQ9NYX4 217 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 SIGLEC8Q9NYZ4 499 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 IL36RNQ9UBH0 155 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 LINC00527Q9UJ94 153 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 COPS3Q9UNS2 423 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 PSG11Q9UQ72 335 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 SAMHD1Q9Y3Z3 626 aaKnown RBP3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 GMPPBQ9Y5P6 360 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 V9GYQ6 96 aa3.33□□□□□ -1.88
CALCOCO2-213ENST00000509112 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
CALCOCO2-213ENST00000509112 IGKV1-9A0A0C4DH69 117 aa3.32□□□□□ -1.88
CALCOCO2-213ENST00000509112 MEX3AA1L020 520 aaKnown RBP3.32□□□□□ -1.88
CALCOCO2-213ENST00000509112 NCBP2LA6PVI3 153 aaKnown RBP3.32□□□□□ -1.88
CALCOCO2-213ENST00000509112 ZNF670-ZNF695F2Z2N8 137 aa3.32□□□□□ -1.88
CALCOCO2-213ENST00000509112 LINC01619G3V211 115 aa3.32□□□□□ -1.88
CALCOCO2-213ENST00000509112 SIRPB1O00241 398 aa3.32□□□□□ -1.88
CALCOCO2-213ENST00000509112 HSPB6O14558 160 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms