RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PFN1P07737 140 aaKnown RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 PGA5P0DJD9 388 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 GLI4P10075 376 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 GZMBP10144 247 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ANOS1P23352 680 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 PAX9P55771 341 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 CARD18P57730 90 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 RPL19P84098 196 aaKnown RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 PSG4Q00888 419 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 RUNX1Q01196 453 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 SLC10A1Q14973 349 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ADIRFQ15847 76 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF124Q15973 351 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 CEACAM21Q3KPI0 293 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 PDZD11Q5EBL8 140 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 DMRTC1Q5HYR2 192 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 PRAMEF20Q5VT98 475 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 GFI1BQ5VTD9 330 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 WDR25Q64LD2 544 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 LCN15Q6UWW0 184 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 BTNL3Q6UXE8 466 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF66Q6ZN08 573 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 Q6ZS52 159 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 C16orf82Q7Z2V1 217 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 MRPL21Q7Z2W9 205 aaKnown RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 CENPVQ7Z7K6 275 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 RPS19BP1Q86WX3 136 aaKnown RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF573Q86YE8 665 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 Q8IYB0 196 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF525Q8N782 197 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 TCTEX1D1Q8N7M0 179 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF709Q8N972 641 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZIC4Q8N9L1 334 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZBTB34Q8NCN2 500 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR10V1Q8NGI7 309 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR5A2Q8NGI9 324 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR2T10Q8NGZ9 312 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 RLN3Q8WXF3 142 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 PSMF1Q92530 271 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 DYRK2Q92630 601 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 APOBEC3DQ96AK3 386 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM45BQ96B21 275 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 CLDN23Q96B33 292 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 GPR146Q96CH1 333 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF845Q96IR2 970 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ADGRG7Q96K78 797 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 RHOVQ96L33 236 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 SGCZQ96LD1 299 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 CIB3Q96Q77 187 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 OR6C1Q96RD1 312 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM147Q9BVK8 224 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 DDA1Q9BW61 102 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 TPSD1Q9BZJ3 242 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 WDR61Q9GZS3 305 aaKnown RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 WNT5BQ9H1J7 359 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 PRO1933Q9H354 126 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 C12orf49Q9H741 205 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF665Q9H7R5 613 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 CRLF2Q9HC73 371 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM9BQ9NQ34 198 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 CCL28Q9NRJ3 127 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 GAB2Q9UQC2 676 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 LAMP3Q9UQV4 416 aa4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 MRPS18CQ9Y3D5 142 aaKnown RBP4.24□□□□□ -1.73
HMGB3P16-201ENST00000508037 ATG2AQ2TAZ0 1938 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 PHF3Q92576 2039 aaKnown RBP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 IGHV3-15A0A0B4J1V0 119 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 A0A0J9YW62 118 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 EPOPA6NHQ4 379 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 ANKRD30BLA7E2S9 258 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF705GA8MUZ8 300 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 F6UZH7 168 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 PDE6DO43924 150 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZIC3O60481 467 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 CYTIPO60759 359 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF205O95201 554 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 SYNGR4O95473 234 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM50AO95807 157 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 CRYABP02511 175 aaKnown RBP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 P04436 131 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 SCTP09683 121 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 SRFP11831 508 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 B4GALT1P15291 398 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 COX5AP20674 150 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 BCL3P20749 454 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 TUBG1P23258 451 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 ARR3P36575 388 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 RANP62826 216 aaKnown RBP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 COL10A1Q03692 680 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 SLC38A11Q08AI6 406 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 TMEM267Q0VDI3 215 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 IL11RAQ14626 422 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 PCOLCEQ15113 449 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 CEACAM16Q2WEN9 425 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 ACTL10Q5JWF8 245 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF324BQ6AW86 544 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 ABLIM2Q6H8Q1 611 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 ZNF880Q6PDB4 577 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 COLCA1Q6ZS62 124 aa4.23□□□□□ -1.73
HMGB3P16-201ENST00000508037 MRPL41Q8IXM3 137 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms