RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 SLC36A2Q495M3 483 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 LRP11Q86VZ4 500 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 ASB13Q8WXK3 278 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 OTUB2Q96DC9 234 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 PYURFQ96I23 114 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 FAM206AQ9NX38 181 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 SLC23A2Q9UGH3 650 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 RPUSD1Q9UJJ7 312 aaKnown RBP2.1□□□□□ -2.07
USP53-204ENST00000507906 TRAPPC1Q9Y5R8 145 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 GPR179Q6PRD1 2367 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 SSH2Q76I76 1423 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 A0A1W2PNN7 141 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 GOLGA6L4A6NEF3 574 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 H0Y980 276 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 C15orf65H3BRN8 121 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 M0QZ92 97 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 ZW10O43264 779 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 TYMSP04818 313 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 GYPCP04921 128 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 MLNP12872 115 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 CD99P14209 185 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 MIPP30301 263 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 AGTR1P30556 359 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 GABRA3P34903 492 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 GABARAPL2P60520 117 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 ACTBP60709 375 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 ACTG1P63261 375 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 DHRS2Q13268 280 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 BCL2A1Q16548 175 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 PTRHD1Q6GMV3 140 aaKnown RBP2.09□□□□□ -2.07
USP53-204ENST00000507906 LCN8Q6JVE9 175 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 SCXQ7RTU7 201 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 LYPD6Q86Y78 171 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 OR10D3Q8NH80 312 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 EEF1AKMT1Q8WVE0 214 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 GALMQ96C23 342 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 ACY3Q96HD9 319 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 GNB1LQ9BYB4 327 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 DERL2Q9GZP9 239 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 KCNIP2Q9NS61 270 aa2.09□□□□□ -2.07
USP53-204ENST00000507906 MRPS16Q9Y3D3 137 aaKnown RBP2.09□□□□□ -2.07
USP53-204ENST00000507906 PLCH2O75038 1416 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.08□□□□□ -2.08
USP53-204ENST00000507906 IGHV3OR15-7A0A075B7D8 119 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 C21orf140B9A014 251 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 K7EQS6 105 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 CXCR6O00574 342 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 E2F6O75461 281 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 IGHV3-53P01767 116 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 CRABP2P29373 138 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 DAPP51397 102 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 HPCAP84074 193 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 TMEM267Q0VDI3 215 aaPredicted RBP2.08□□□□□ -2.08
USP53-204ENST00000507906 ITGB3BPQ13352 177 aaPredicted RBP2.08□□□□□ -2.08
USP53-204ENST00000507906 PPP1R1AQ13522 171 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 CLEC12BQ2HXU8 276 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 C10orf91Q5T1B1 145 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 ATP5L2Q7Z4Y8 100 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 RPRMLQ8N4K4 120 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 C3orf22Q8N5N4 141 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 Q8NAQ8 132 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 OR5K1Q8NHB7 308 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 ERMNQ8TAM6 284 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 DHRS9Q9BPW9 319 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 TIPINQ9BVW5 301 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 PARVAQ9NVD7 372 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 TMEM216Q9P0N5 145 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 GLS2Q9UI32 602 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 LINC00527Q9UJ94 153 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 COL4A4P53420 1690 aaPredicted RBP2.08□□□□□ -2.08
USP53-204ENST00000507906 ADAMTSL1Q8N6G6 1762 aa2.08□□□□□ -2.08
USP53-204ENST00000507906 CEP170Q5SW79 1584 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 GGTLC3B5MD39 225 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 HLA-DRAP01903 254 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 REG1AP05451 166 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 C8orf88P0DMB2 117 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 ZNF708P17019 499 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 HSPA9P38646 679 aaKnown RBP2.07□□□□□ -2.08
USP53-204ENST00000507906 H2BFSP57053 126 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 TSPAN31Q12999 210 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 OR8G1Q15617 311 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 SCGB1D4Q6XE38 83 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 ZBTB8OSQ8IWT0 167 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 OR8J2Q8NGG1 315 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 OR52B2Q96RD2 323 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 MED28Q9H204 178 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 HDGFL3Q9Y3E1 203 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 ALG5Q9Y673 324 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 A0A1W2PP64 1363 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 MAP3K5Q99683 1374 aa2.07□□□□□ -2.08
USP53-204ENST00000507906 TRBV24-1A0A075B6N3 115 aa2.06□□□□□ -2.08
USP53-204ENST00000507906 MRASO14807 208 aa2.06□□□□□ -2.08
USP53-204ENST00000507906 SH2D1AO60880 128 aa2.06□□□□□ -2.08
USP53-204ENST00000507906 CPSF4O95639 269 aaKnown RBP2.06□□□□□ -2.08
USP53-204ENST00000507906 HBZP02008 142 aa2.06□□□□□ -2.08
USP53-204ENST00000507906 IL6P05231 212 aa2.06□□□□□ -2.08
USP53-204ENST00000507906 LINC00614P0C842 121 aa2.06□□□□□ -2.08
USP53-204ENST00000507906 OCM2P0CE71 109 aa2.06□□□□□ -2.08
USP53-204ENST00000507906 RNASE2P10153 161 aaKnown RBP2.06□□□□□ -2.08
USP53-204ENST00000507906 ZNF22P17026 224 aaPredicted RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms