RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 PVALBP20472 110 aaPredicted RBP18.89■□□□□ 0.61
PCDH1-204ENST00000503492 ASCL1P50553 236 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 ARHGDIBP52566 201 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 COL10A1Q03692 680 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 FAM180AQ6UWF9 173 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 IL34Q6ZMJ4 242 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 LRRC29Q8WV35 223 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 GPR146Q96CH1 333 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 GINS3Q9BRX5 216 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 SFXN3Q9BWM7 321 aa18.89■□□□□ 0.61
PCDH1-204ENST00000503492 TMEM218A2RU14 115 aa18.88■□□□□ 0.61
PCDH1-204ENST00000503492 CAV2P51636 162 aa18.88■□□□□ 0.61
PCDH1-204ENST00000503492 SMIM21Q3B7S5 101 aa18.88■□□□□ 0.61
PCDH1-204ENST00000503492 ABHD17AQ96GS6 310 aa18.88■□□□□ 0.61
PCDH1-204ENST00000503492 TMEM50AO95807 157 aa18.88■□□□□ 0.61
PCDH1-204ENST00000503492 DRAM1Q8N682 238 aa18.88■□□□□ 0.61
PCDH1-204ENST00000503492 PITX3O75364 302 aa18.87■□□□□ 0.61
PCDH1-204ENST00000503492 EPHA1P21709 976 aa18.87■□□□□ 0.61
PCDH1-204ENST00000503492 FAM53AQ6NSI3 398 aaPredicted RBP18.87■□□□□ 0.61
PCDH1-204ENST00000503492 BTNL8Q6UX41 500 aa18.87■□□□□ 0.61
PCDH1-204ENST00000503492 GALMQ96C23 342 aa18.87■□□□□ 0.61
PCDH1-204ENST00000503492 MUCL1Q96DR8 90 aa18.87■□□□□ 0.61
PCDH1-204ENST00000503492 LYRM2Q9NU23 88 aaPredicted RBP18.87■□□□□ 0.61
PCDH1-204ENST00000503492 SPEF1Q9Y4P9 236 aa18.87■□□□□ 0.61
PCDH1-204ENST00000503492 OOEPA6NGQ2 149 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 IFNL4K9M1U5 179 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 CRYAAP02489 173 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 SEC11BP0C7V7 166 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 EGR1P18146 543 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 CD200P41217 278 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 GABRA2P47869 451 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 ID4P47928 161 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 BLOC1S1P78537 153 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 DEFA5Q01523 94 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 MZT1Q08AG7 82 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 IZUMO4Q1ZYL8 232 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 ODF3L1Q8IXM7 274 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 LRRC46Q96FV0 321 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 PLEKHF2Q9H8W4 249 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 PARP11Q9NR21 331 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 CADP27708 2225 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 HBZP02008 142 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 SPP1P10451 314 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 VAMP2P63027 116 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 NKX6-1P78426 367 aaPredicted RBP18.86■□□□□ 0.61
PCDH1-204ENST00000503492 ZNF585BQ52M93 769 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 Q6ZRG5 221 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 TMEM252Q8N6L7 170 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 CD177Q8N6Q3 437 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 TMEM231Q9H6L2 316 aa18.86■□□□□ 0.61
PCDH1-204ENST00000503492 IGHV3-13P01766 116 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 ADCYAP1P18509 176 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 GLRXP35754 106 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 GLIPR1P48060 266 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 FAM27E3Q08E93 113 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 C3orf36Q3SXR2 165 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 SPRNQ5BIV9 151 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 Q6ZRM9 215 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 TPRX1Q8N7U7 411 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 OR52L2PQ8NGH6 319 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 MRGPRDQ8TDS7 321 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 TP53TG5Q9Y2B4 290 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 RNF115Q9Y4L5 304 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 PTPRZ1P23471 2315 aaPredicted RBP18.85■□□□□ 0.61
PCDH1-204ENST00000503492 A0A1B0GU03 582 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 CHST1O43916 411 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 SLC25A6P12236 298 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 ZNF16P17020 682 aaPredicted RBP18.85■□□□□ 0.61
PCDH1-204ENST00000503492 IL2RGP31785 369 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 KRBOX4Q5JUW0 171 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 C22orf34Q6ZV56 151 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 SH3BGRL3Q9H299 93 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 FAM212BQ9NTI7 297 aaPredicted RBP18.85■□□□□ 0.61
PCDH1-204ENST00000503492 SSUH2Q9Y2M2 353 aa18.85■□□□□ 0.61
PCDH1-204ENST00000503492 A8MXE2 369 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 MMP9P14780 707 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 OMGP23515 440 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 FOXC1Q12948 553 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 VHLLQ6RSH7 139 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 HSD17B11Q8NBQ5 300 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 LIN7CQ9NUP9 197 aaKnown RBP18.84■□□□□ 0.61
PCDH1-204ENST00000503492 PIGBOS1A0A0B4J2F0 54 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 KIAA1324LA8MWY0 1029 aaPredicted RBP18.84■□□□□ 0.61
PCDH1-204ENST00000503492 BMP5P22003 454 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 PAX9P55771 341 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 CLINT1Q14677 625 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 LSM10Q969L4 123 aaKnown RBP18.84■□□□□ 0.61
PCDH1-204ENST00000503492 SLC25A31Q9H0C2 315 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 ESRP2Q9H6T0 727 aaKnown RBP18.84■□□□□ 0.61
PCDH1-204ENST00000503492 RNF150Q9ULK6 438 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 FAM96BQ9Y3D0 163 aa18.84■□□□□ 0.61
PCDH1-204ENST00000503492 SRRM5B3KS81 715 aa18.83■□□□□ 0.61
PCDH1-204ENST00000503492 IGKV1-5P01602 117 aa18.83■□□□□ 0.61
PCDH1-204ENST00000503492 PRDX2P32119 198 aa18.83■□□□□ 0.61
PCDH1-204ENST00000503492 KLF3P57682 345 aaPredicted RBP18.83■□□□□ 0.61
PCDH1-204ENST00000503492 SWI5Q1ZZU3 235 aa18.83■□□□□ 0.61
PCDH1-204ENST00000503492 OR13A1Q8NGR1 328 aa18.83■□□□□ 0.61
PCDH1-204ENST00000503492 RNASE11Q8TAA1 199 aaKnown RBP18.83■□□□□ 0.61
PCDH1-204ENST00000503492 TMEM171Q8WVE6 324 aa18.83■□□□□ 0.61
PCDH1-204ENST00000503492 TREM1Q9NP99 234 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms