RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 C1orf105O95561 183 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 FBXO45P0C2W1 286 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 IGLC2P0DOY2 106 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 IGLC3P0DOY3 106 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 AADACP22760 399 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 ATP6V0CP27449 155 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 RHOBP62745 196 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 RPL24P83731 157 aaKnown RBP2.4□□□□□ -2.02
NEDD4-204ENST00000503468 OR1Q1Q15612 314 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 MAJINQ3KP22 176 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 SPIN3Q5JUX0 258 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 IER5LQ5T953 404 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 BAGE3Q86Y29 109 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 BAGE2Q86Y30 109 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 RBM45Q8IUH3 476 aaKnown RBP2.4□□□□□ -2.02
NEDD4-204ENST00000503468 TMEM252Q8N6L7 170 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF709Q8N972 641 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 SDF2Q99470 211 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 SLC39A9Q9NUM3 307 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 LRIT1Q9P2V4 623 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 GRHPRQ9UBQ7 328 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 B4GALT6Q9UBX8 382 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 SLC23A2Q9UGH3 650 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF443Q9Y2A4 671 aaPredicted RBP2.4□□□□□ -2.02
NEDD4-204ENST00000503468 HS3ST3B1Q9Y662 390 aa2.4□□□□□ -2.02
NEDD4-204ENST00000503468 HEATR1Q9H583 2144 aaKnown RBP2.4□□□□□ -2.02
NEDD4-204ENST00000503468 ANK2Q01484 3957 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 SAA2-SAA4A0A096LPE2 208 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 A0A1W2PR48 441 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 TMEM14DPA8MWL7 114 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 M0QYG6 137 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CORTO00230 105 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 NME2P1O60361 137 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 MPDU1O75352 247 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 TUSC2O75896 110 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 DDAH2O95865 285 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 HAND1O96004 215 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CSTAP01040 98 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 HLA-DRB1P01911 266 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 THBDP07204 575 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 GLRA1P23415 457 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CYB561P49447 251 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 HTD2P86397 168 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 ADORA2A-AS1P86434 159 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 OR8B8Q15620 311 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 SMIM21Q3B7S5 101 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 RAET1LQ5VY80 246 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 HLA-DQA1Q5Y7H0 255 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF787Q6DD87 383 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 LEG1Q6P5S2 330 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CXCL17Q6UXB2 119 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 PARS2Q7L3T8 475 aaKnown RBP2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CFAP52Q8N1V2 620 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 ABHD3Q8WU67 409 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 GNRHR2Q96P88 292 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 TM7SF3Q9NS93 570 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 FRRS1LQ9P0K9 344 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 SMPXQ9UHP9 88 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 DSCAMO60469 2012 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 PPIAL4EA0A075B759 164 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 PPIAL4CA0A0B4J2A2 164 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CEBPZOSA8MTT3 80 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 PPIAL4DF5H284 164 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 DVL2O14641 736 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 MAS1P04201 325 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 PPIAL4FP0DN26 164 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 IL9P15248 144 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 GRPRP30550 384 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 SELENOVP59797 346 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 DEFB103AP81534 67 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 RBPJQ06330 500 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 C18orf21Q32NC0 220 aaPredicted RBP2.4□□□□□ -2.03
NEDD4-204ENST00000503468 STPG1Q5TH74 334 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 FAM58AQ8N1B3 248 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 OR10G3Q8NGC4 313 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 C11orf40Q8WZ69 217 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 FAM3CQ92520 227 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CNRIP1Q96F85 164 aaPredicted RBP2.4□□□□□ -2.03
NEDD4-204ENST00000503468 GFI1Q99684 422 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 SPXQ9BT56 116 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CST9LQ9H4G1 147 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 C1RLQ9NZP8 487 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 YTHDF2Q9Y5A9 579 aaKnown RBP2.4□□□□□ -2.03
NEDD4-204ENST00000503468 ESPL1Q14674 2120 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 LAMA3Q16787 3333 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 TRAV8-7A0A075B6U6 113 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 EDDM13A0A1B0GTR0 161 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 MEIS3P1A6NDR6 274 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 SERINC4A6NH21 518 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 SDCBPO00560 298 aaPredicted RBP2.4□□□□□ -2.03
NEDD4-204ENST00000503468 SCDO00767 359 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CDC42EP2O14613 210 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 HS3ST1O14792 307 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 DEGS1O15121 323 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 TLX3O43711 291 aaPredicted RBP2.4□□□□□ -2.03
NEDD4-204ENST00000503468 PDE6DO43924 150 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 FGF17O60258 216 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CLDN7O95471 211 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 MRPL3P09001 348 aaKnown RBP2.4□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF20P17024 532 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms