RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 NEUROG1Q92886 237 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 TMEM56Q96MV1 263 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 MS4A5Q9H3V2 200 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 GSKIPQ9P0R6 139 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 RALYQ9UKM9 306 aaKnown RBP18.37■□□□□ 0.53
PTPN13-205ENST00000502971 TMED3Q9Y3Q3 217 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 MAB21L2Q9Y586 359 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 TMEM56-RWDD3S4R434 201 aa18.37■□□□□ 0.53
PTPN13-205ENST00000502971 PLCE1Q9P212 2302 aa18.36■□□□□ 0.53
PTPN13-205ENST00000502971 GZMHP20718 246 aa18.36■□□□□ 0.53
PTPN13-205ENST00000502971 GNLYP22749 145 aa18.36■□□□□ 0.53
PTPN13-205ENST00000502971 EDDM3AQ14507 147 aa18.36■□□□□ 0.53
PTPN13-205ENST00000502971 FAM201AQ5SY85 155 aa18.36■□□□□ 0.53
PTPN13-205ENST00000502971 PRSS54Q6PEW0 395 aa18.36■□□□□ 0.53
PTPN13-205ENST00000502971 RNF126Q9BV68 326 aa18.36■□□□□ 0.53
PTPN13-205ENST00000502971 SAP30LQ9HAJ7 183 aa18.36■□□□□ 0.53
PTPN13-205ENST00000502971 DYNLRB1Q9NP97 96 aa18.36■□□□□ 0.53
PTPN13-205ENST00000502971 RBM7Q9Y580 266 aaKnown RBP18.36■□□□□ 0.53
PTPN13-205ENST00000502971 PIGBOS1A0A0B4J2F0 54 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 ODAMA1E959 279 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 H0Y980 276 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 SPINT2O43291 252 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 RP2O75695 350 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 IFNA7P01567 189 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 UCP1P25874 307 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 LYZL2Q7Z4W2 148 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 KCNRGQ8N5I3 272 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 TPRX1Q8N7U7 411 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 INO80EQ8NBZ0 244 aaPredicted RBP18.35■□□□□ 0.53
PTPN13-205ENST00000502971 ZNRF1Q8ND25 227 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 NINJ1Q92982 152 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 ARL11Q969Q4 196 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 FAM234AQ9H0X4 552 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 ZNF665Q9H7R5 613 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 DUXBA0A1W2PPF3 345 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 C15orf65H3BRN8 121 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 PRB1P04280 392 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 P2RX3P56373 397 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 HTD2P86397 168 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 ESCO2Q56NI9 601 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 TMEM268Q5VZI3 342 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 ZNF695Q8IW36 515 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 C1orf87Q8N0U7 546 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 LHFPL5Q8TAF8 219 aa18.35■□□□□ 0.53
PTPN13-205ENST00000502971 CISD1Q9NZ45 108 aaKnown RBP18.35■□□□□ 0.53
PTPN13-205ENST00000502971 C1QL1O75973 258 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 CDS2O95674 445 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 IGLV2-14P01704 120 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 F2RP25116 425 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 AP2S1P53680 142 aaPredicted RBP18.34■□□□□ 0.53
PTPN13-205ENST00000502971 TFF3Q07654 80 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 RAB32Q13637 225 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 MST1LQ2TV78 715 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 MEX3BQ6ZN04 569 aaKnown RBP18.34■□□□□ 0.53
PTPN13-205ENST00000502971 ZCCHC24Q8N2G6 241 aaKnown RBP18.34■□□□□ 0.53
PTPN13-205ENST00000502971 ZBTB34Q8NCN2 500 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 OR52L2PQ8NGH6 319 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 DCUN1D4Q92564 292 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 IL22RA2Q969J5 263 aa18.34■□□□□ 0.53
PTPN13-205ENST00000502971 RNF222A6NCQ9 220 aa18.33■□□□□ 0.52
PTPN13-205ENST00000502971 H0YIZ8 118 aa18.33■□□□□ 0.52
PTPN13-205ENST00000502971 OR8U9P0C7N5 309 aa18.33■□□□□ 0.52
PTPN13-205ENST00000502971 UQCRFS1P47985 274 aa18.33■□□□□ 0.52
PTPN13-205ENST00000502971 ZNF788Q6ZQV5 615 aa18.33■□□□□ 0.52
PTPN13-205ENST00000502971 SELENOHQ8IZQ5 122 aaKnown RBP18.33■□□□□ 0.52
PTPN13-205ENST00000502971 SLC35G3Q8N808 338 aa18.33■□□□□ 0.52
PTPN13-205ENST00000502971 OR8U1Q8NH10 309 aa18.33■□□□□ 0.52
PTPN13-205ENST00000502971 GAFA1Q96PS6 74 aa18.33■□□□□ 0.52
PTPN13-205ENST00000502971 OR6C3Q9NZP0 311 aa18.33■□□□□ 0.52
PTPN13-205ENST00000502971 LGALS8O00214 317 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 TNFSF12O43508 249 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 PLAUP00749 431 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 AGAP20933 346 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 SSTR5P35346 364 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 MSMO1Q15800 293 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 DEFB108BQ8NET1 73 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 C14orf79Q96F83 325 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 PARP12Q9H0J9 701 aaKnown RBP18.32■□□□□ 0.52
PTPN13-205ENST00000502971 KCNS2Q9ULS6 477 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 DYSFO75923 2080 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 TRAV38-1A0A0B4J264 116 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 SIAH2O43255 324 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 ZNF672Q499Z4 452 aaPredicted RBP18.32■□□□□ 0.52
PTPN13-205ENST00000502971 SLC51BQ86UW2 128 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 TGIF2LYQ8IUE0 185 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 ZNF808Q8N4W9 903 aaPredicted RBP18.32■□□□□ 0.52
PTPN13-205ENST00000502971 TMEM204Q9BSN7 226 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 RAB9BQ9NP90 201 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 OR2S2Q9NQN1 319 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 ZFP57Q9NU63 452 aa18.32■□□□□ 0.52
PTPN13-205ENST00000502971 KANTRA0A1W2PQU2 76 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 TMEM178BH3BS89 294 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 GYPAP02724 150 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 NUP62P37198 522 aaPredicted RBP18.31■□□□□ 0.52
PTPN13-205ENST00000502971 HTR2BP41595 481 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 EDDM3BP56851 147 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 S100A10P60903 97 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 EXOSC2Q13868 293 aaKnown RBP18.31■□□□□ 0.52
PTPN13-205ENST00000502971 SWI5Q1ZZU3 235 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 ZNF645Q8N7E2 425 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms