RNA–Protein interactions for RNA: ENST00000497658.5

PHC3-217, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 2,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-217ENST00000497658 TDGF1P3P51864 188 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 RPS18P62269 152 aaKnown RBP4.84□□□□□ -1.63
PHC3-217ENST00000497658 RPL23P62829 140 aaKnown RBP4.84□□□□□ -1.63
PHC3-217ENST00000497658 HERPUD1Q15011 391 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 C16orf47Q6ZP98 133 aaPredicted RBP4.84□□□□□ -1.63
PHC3-217ENST00000497658 RABEPKQ7Z6M1 372 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 ZNF573Q86YE8 665 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 ZNF525Q8N782 197 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 OR1F12Q8NHA8 337 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 THAP3Q8WTV1 239 aaPredicted RBP4.84□□□□□ -1.63
PHC3-217ENST00000497658 DYRK2Q92630 601 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 EXTL1Q92935 676 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 LHX4Q969G2 390 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 ZNF501Q96CX3 271 aaPredicted RBP4.84□□□□□ -1.63
PHC3-217ENST00000497658 SF3B5Q9BWJ5 86 aaKnown RBP4.84□□□□□ -1.63
PHC3-217ENST00000497658 ULBP2Q9BZM5 246 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 WDR61Q9GZS3 305 aaKnown RBP4.84□□□□□ -1.63
PHC3-217ENST00000497658 FGF21Q9NSA1 209 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 FKBP11Q9NYL4 201 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 SHANK1Q9Y566 2161 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 EXPH5Q8NEV8 1989 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 ATG2AQ2TAZ0 1938 aa4.84□□□□□ -1.63
PHC3-217ENST00000497658 MYO7BQ6PIF6 2116 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 IGHV1OR21-1A0A087WYE8 117 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 IGHV3-20A0A0C4DH32 117 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 hCG_38984A0A1B0GV85 526 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 OR6C6A6NF89 314 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 MARCH11A6NNE9 402 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 TOX3O15405 576 aaPredicted RBP4.84□□□□□ -1.64
PHC3-217ENST00000497658 CA3P07451 260 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 CYC1P08574 325 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 GZMHP20718 246 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 CD38P28907 300 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 PCBD1P61457 104 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 RANP62826 216 aaKnown RBP4.84□□□□□ -1.64
PHC3-217ENST00000497658 ZNF92Q03936 586 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 FOXL1Q12952 345 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 ATP6V1FQ16864 119 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 FAM69BQ5VUD6 431 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 Q6ZPA2 131 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 LINC00596Q86U02 117 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 C7orf61Q8IZ16 206 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 ZNF611Q8N823 705 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 OR10G3Q8NGC4 313 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 OR2AE1Q8NHA4 323 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 MRPL30Q8TCC3 161 aaKnown RBP4.84□□□□□ -1.64
PHC3-217ENST00000497658 NAT6Q93015 286 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 SPACA9Q96E40 222 aaPredicted RBP4.84□□□□□ -1.64
PHC3-217ENST00000497658 RSG1Q9BU20 258 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 STRADBQ9C0K7 418 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 PLK3Q9H4B4 646 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 CHODLQ9H9P2 273 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 PSENENQ9NZ42 101 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 ZNF581Q9P0T4 197 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 FUT9Q9Y231 359 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 GOLT1BQ9Y3E0 138 aa4.84□□□□□ -1.64
PHC3-217ENST00000497658 NCOA6Q14686 2063 aaPredicted RBP4.83□□□□□ -1.64
PHC3-217ENST00000497658 TRBV6-6A0A0A6YYG2 114 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 CTXND1A0A1B0GTU2 59 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 A0A1W2PPQ1 181 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 CCDC85CA6NKD9 419 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 DLEU1O43261 78 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 SOX15O60248 233 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 SCGB1D1O95968 90 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 OPN1LWP04000 364 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 RPLP1P05386 114 aaKnown RBP4.83□□□□□ -1.64
PHC3-217ENST00000497658 CD55P08174 381 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 ZNF25P17030 456 aaPredicted RBP4.83□□□□□ -1.64
PHC3-217ENST00000497658 TUBG1P23258 451 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 OR3A1P47881 315 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 TNFSF10P50591 281 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 CASP6P55212 293 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 UBE2NP61088 152 aaKnown RBP4.83□□□□□ -1.64
PHC3-217ENST00000497658 FGF12P61328 243 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 ERVS71-1P61550 626 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 PAFAH1B2P68402 229 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 P2RY6Q15077 328 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 NKAIN1Q4KMZ8 207 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 TRIM61Q5EBN2 209 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 PHYHD1Q5SRE7 291 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 PLCXD3Q63HM9 321 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 WDR74Q6RFH5 385 aaPredicted RBP4.83□□□□□ -1.64
PHC3-217ENST00000497658 CPT1CQ8TCG5 803 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 TMEM37Q8WXS4 190 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 TAF15Q92804 592 aaKnown RBP eCLIP4.83□□□□□ -1.64
PHC3-217ENST00000497658 SPSB4Q96A44 273 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 GPR146Q96CH1 333 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 ZNF385AQ96PM9 386 aaKnown RBP4.83□□□□□ -1.64
PHC3-217ENST00000497658 PCGF1Q9BSM1 259 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 PARLQ9H300 379 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 CCL28Q9NRJ3 127 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 C19orf25Q9UFG5 118 aaPredicted RBP4.83□□□□□ -1.64
PHC3-217ENST00000497658 NAGKQ9UJ70 344 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 OR2W1Q9Y3N9 320 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 UNC80Q8N2C7 3258 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 CHD9Q3L8U1 2897 aa4.83□□□□□ -1.64
PHC3-217ENST00000497658 IGKV1D-13A0A0B4J2D9 117 aa4.82□□□□□ -1.64
PHC3-217ENST00000497658 LRRC3CA6NJW4 275 aa4.82□□□□□ -1.64
PHC3-217ENST00000497658 GJE1A6NN92 205 aa4.82□□□□□ -1.64
PHC3-217ENST00000497658 CD300LBA8K4G0 201 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms