RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 FAM90A24PP0C7X0 464 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 PPIAL4FP0DN26 164 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 COX6B1P14854 86 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 DAOP14920 347 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 OMGP23515 440 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 DTYMKP23919 212 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 IL2RGP31785 369 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 TAS2R46P59540 309 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 HERV-K104P61576 105 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 HLA-DRB3P79483 266 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 ZNF146Q15072 292 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 FCN2Q15485 313 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 ABCA11PQ4W5N1 156 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 ACTBL2Q562R1 376 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 NHLRC3Q5JS37 347 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 ATPAF1Q5TC12 328 aaPredicted RBP3.95□□□□□ -1.78
CMSS1-209ENST00000497345 KCTD9Q7L273 389 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 LINC00596Q86U02 117 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 AKAP14Q86UN6 197 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 FAM185AQ8N0U4 392 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 ZNF565Q8N9K5 539 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 DUSP18Q8NEJ0 188 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 Q8NFD4 153 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 OR5AP2Q8NGF4 316 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 OR13A1Q8NGR1 328 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 OR13C8Q8NGS7 320 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 OR10Z1Q8NGY1 313 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 OR6F1Q8NGZ6 308 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 SECTM1Q8WVN6 248 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 LEAP2Q969E1 77 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 COQ2Q96H96 371 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 GAFA1Q96PS6 74 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 PRRT1Q99946 306 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 RAB1BQ9H0U4 201 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 DNTTIP1Q9H147 329 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 MED28Q9H204 178 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 OR51J1Q9H342 316 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 LIME1Q9H400 295 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 TAF9BQ9HBM6 251 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 MYOZ1Q9NP98 299 aaPredicted RBP3.95□□□□□ -1.78
CMSS1-209ENST00000497345 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.95□□□□□ -1.78
CMSS1-209ENST00000497345 RCC2Q9P258 522 aaKnown RBP3.95□□□□□ -1.78
CMSS1-209ENST00000497345 SLC23A1Q9UHI7 598 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 KCNS2Q9ULS6 477 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 PPIAL4AQ9Y536 164 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 RBM7Q9Y580 266 aaKnown RBP3.95□□□□□ -1.78
CMSS1-209ENST00000497345 MAB21L2Q9Y586 359 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 NPTNQ9Y639 398 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 CFAP46Q8IYW2 2715 aa3.95□□□□□ -1.78
CMSS1-209ENST00000497345 ANKHD1Q8IWZ3 2542 aaKnown RBP3.94□□□□□ -1.78
CMSS1-209ENST00000497345 DSCAMO60469 2012 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 TRAV38-1A0A0B4J264 116 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 IGKV1-6A0A0C4DH72 117 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 TEX13DA0A0J9YY54 714 aaPredicted RBP3.94□□□□□ -1.78
CMSS1-209ENST00000497345 KIR2DS1A0A191URI9 304 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 A0A1B0GWJ7 208 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 ODAMA1E959 279 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 HMX3A6NHT5 357 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 FAM25EA8MYX2 175 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 C12orf77C9JDV5 145 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 H3BUI4 141 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 CCSO14618 274 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 GOSR2O14653 212 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 TNFSF12O43508 249 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 NDUFB3O43676 98 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 CA11O75493 328 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 CCNKO75909 580 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 SPDEFO95238 335 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 DIRAS3O95661 229 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 NAPSAO96009 420 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 HBZP02008 142 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 TK1P04183 234 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 GLAP06280 429 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 HNRNPCP07910 306 aaKnown RBP eCLIP3.94□□□□□ -1.78
CMSS1-209ENST00000497345 ACAA1P09110 424 aaPredicted RBP3.94□□□□□ -1.78
CMSS1-209ENST00000497345 OR4E1P0C645 316 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 ZNF728P0DKX0 622 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 EGR2P11161 476 aaPredicted RBP3.94□□□□□ -1.78
CMSS1-209ENST00000497345 PLA2G2AP14555 144 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 NFYBP25208 207 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 SSTR5P35346 364 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 PPP1CCP36873 323 aaKnown RBP3.94□□□□□ -1.78
CMSS1-209ENST00000497345 CEACAM6P40199 344 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 MDH2P40926 338 aaKnown RBP3.94□□□□□ -1.78
CMSS1-209ENST00000497345 KIR2DS4P43632 304 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 PPOXP50336 477 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 BTG1P62324 171 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 BLOC1S1P78537 153 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 GNMTQ14749 295 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 KIR2DS1Q14954 304 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 HERPUD1Q15011 391 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 ZMYND11Q15326 602 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 RBMS2Q15434 407 aaKnown RBP3.94□□□□□ -1.78
CMSS1-209ENST00000497345 VAX1Q5SQQ9 334 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 PRAMEF5Q5TYX0 476 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 STUMQ69YW2 141 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 ZNF497Q6ZNH5 498 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 PEG10Q86TG7 708 aaKnown RBP3.94□□□□□ -1.78
CMSS1-209ENST00000497345 C1orf87Q8N0U7 546 aa3.94□□□□□ -1.78
CMSS1-209ENST00000497345 MUC20Q8N307 709 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms