RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 DPY30Q9C005 99 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2H1Q9GZK4 316 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SH2D2AQ9NP31 389 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC52A3Q9NQ40 469 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ASIC5Q9NY37 505 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 PLEKHB1Q9UF11 243 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CES1P1Q9UKY3 287 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 VDAC3Q9Y277 283 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SOX21Q9Y651 276 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CRB1P82279 1406 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ARHGAP5Q13017 1502 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CDC42BPBQ9Y5S2 1711 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 NSG1A0A0A6YYJ2 146 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 DHRS12A0PJE2 317 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 DAPL1A0PJW8 107 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ODAMA1E959 279 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ZAR1LA6NP61 321 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 F8VVB4 439 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 F8VWA3 439 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 G3V2L1 256 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 MLNRO43193 412 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SYNGR1O43759 233 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 VTNP04004 478 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 PFN1P07737 140 aaKnown RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 AADACP22760 399 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CDK2P24941 298 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 BLVRBP30043 206 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 PPIFP30405 207 aaKnown RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 RPL13AP40429 203 aaKnown RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 APOBEC1P41238 236 aaKnown RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CXCL12P48061 93 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CRISP3P54108 245 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SRYQ05066 204 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 IL10RBQ08334 325 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 GUSBP1Q15486 140 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 TGIF1Q15583 401 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ACOT6Q3I5F7 207 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 TP53I3Q53FA7 332 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 TCEAL5Q5H9L2 206 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF684Q5T5D7 378 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 OLFML2AQ68BL7 652 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 UFSP1Q6NVU6 142 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CDC42EP5Q6NZY7 148 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SFXN4Q6P4A7 337 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 Q6ZN92 141 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 C16orf82Q7Z2V1 217 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 GLCCI1Q86VQ1 547 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CLDN19Q8N6F1 224 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF433Q8N7K0 673 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SCCPDHQ8NBX0 429 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 PNPLA2Q96AD5 504 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SLC25A46Q96AG3 418 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SLAMF6Q96DU3 332 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 WDYHV1Q96HA8 205 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SEC22AQ96IW7 307 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 DERL3Q96Q80 235 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 NAA38Q9BRA0 125 aaKnown RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 GATA5Q9BWX5 397 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 NPFFR1Q9GZQ6 430 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 IFI27L2Q9H2X8 130 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 BANF2Q9H503 90 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 KCNJ16Q9NPI9 418 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 IL36GQ9NZH8 169 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 CCDC167Q9P0B6 97 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF443Q9Y2A4 671 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 COL16A1Q07092 1604 aaPredicted RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 ARHGEF28Q8N1W1 1705 aaKnown RBP2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 SIGLEC1Q9BZZ2 1709 aa2.61□□□□□ -1.99
SNRNP48-202ENST00000496946 TRAV18A0A075B6X5 111 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 A0A0B4J2A0 478 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 SMIM28A0A1B0GU29 152 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 KANTRA0A1W2PQU2 76 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 IGLC7A0M8Q6 106 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 GABRPO00591 440 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PIRO00625 290 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TAX1BP3O14907 124 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PRKNO60260 465 aaPredicted RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2A4O95047 310 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF682O95780 498 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 OR2H2O95918 312 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF728P0DKX0 622 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 GP9P14770 177 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 RPL3P39023 403 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 CDKN2AP42771 156 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 THBS3P49746 956 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PFN3P60673 137 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 OSTNP61366 133 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TGFBR3Q03167 851 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 CD164Q04900 197 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ENDOGQ14249 297 aaKnown RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 CCL15Q16663 113 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ZSWIM7Q19AV6 140 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 ZNF57Q68EA5 555 aaPredicted RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 RASL11AQ6T310 242 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 GDPGP1Q6ZNW5 385 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 PPP1R27Q86WC6 154 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TMEM219Q86XT9 240 aa2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 RYBPQ8N488 228 aaPredicted RBP2.6□□□□□ -1.99
SNRNP48-202ENST00000496946 TCEANCQ8N8B7 351 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms