RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 PDZD11Q5EBL8 140 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 DUSP18Q8NEJ0 188 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 OR4D5Q8NGN0 318 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 OR1J2Q8NGS2 313 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 OR13C8Q8NGS7 320 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 OR52I2Q8NH67 350 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 NELFAQ9H3P2 528 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 ABI3Q9P2A4 366 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 HHLA2Q9UM44 414 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 POLEQ07864 2286 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 COL6A6A6NMZ7 2263 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 CREBBPQ92793 2442 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 A0A1B0GTI1 187 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 hCG_38984A0A1B0GV85 526 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 LOC102725191A0A1B0GVB3 256 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 FAM240BA0A1B0GVZ2 78 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 GJE1A6NN92 205 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 ST8SIA3O43173 380 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 LYRM1O43325 122 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 MRPL33O75394 65 aaKnown RBP5.28□□□□□ -1.56
SSBP1-213ENST00000496622 PRB1P04280 392 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 FABP4P15090 132 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF708P17019 499 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF32P17041 273 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 CXCL3P19876 107 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 INPP1P49441 399 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 SSBP2P81877 361 aaPredicted RBP5.28□□□□□ -1.56
SSBP1-213ENST00000496622 IGFBP7Q16270 282 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 SLC36A2Q495M3 483 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 HIST2H3PS2Q5TEC6 136 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 CCDC144NLQ6NUI1 221 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 ADAM5Q6NVV9 412 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 C20orf196Q8IYI0 205 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 BPIFB2Q8N4F0 458 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 RNF152Q8N8N0 203 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 LYZL4Q96KX0 146 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 TRIB1Q96RU8 372 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF629Q9UEG4 869 aaPredicted RBP5.28□□□□□ -1.56
SSBP1-213ENST00000496622 HSF4Q9ULV5 492 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 V9GYS6 101 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 KIAA1549Q9HCM3 1950 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 FAM230AA0A1W2PPH8 454 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 TUSC2O75896 110 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 MT-ND4P03905 459 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 HPNP05981 417 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 OR10J4P0C629 311 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 GZMBP10144 247 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 FAHP16930 419 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 PTH2RP49190 550 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 UBE2KP61086 200 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 RPL32P62910 135 aaKnown RBP5.28□□□□□ -1.56
SSBP1-213ENST00000496622 JOSD1Q15040 202 aaPredicted RBP5.28□□□□□ -1.56
SSBP1-213ENST00000496622 TMEM69Q5SWH9 247 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 C10orf91Q5T1B1 145 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 UQCC3Q6UW78 93 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF705AQ6ZN79 300 aaPredicted RBP5.28□□□□□ -1.56
SSBP1-213ENST00000496622 C1QL2Q7Z5L3 287 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 SIAH3Q8IW03 269 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 ZFP62Q8NB50 900 aaPredicted RBP5.28□□□□□ -1.56
SSBP1-213ENST00000496622 NHLRC2Q8NBF2 726 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 TMEM185AQ8NFB2 350 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 RNF141Q8WVD5 230 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 TMEM54Q969K7 222 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 FAM3DQ96BQ1 224 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 FOXB1Q99853 325 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 GINS4Q9BRT9 223 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 OR2J1Q9GZK6 312 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 GPN1Q9HCN4 374 aaPredicted RBP5.28□□□□□ -1.56
SSBP1-213ENST00000496622 RBFOX1Q9NWB1 397 aaKnown RBP5.28□□□□□ -1.56
SSBP1-213ENST00000496622 DOK5Q9P104 306 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 B4GALT7Q9UBV7 327 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 PRSS50Q9UI38 385 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 DUSP13Q9UII6 198 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 FLVCR2Q9UPI3 526 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 NPTNQ9Y639 398 aa5.28□□□□□ -1.56
SSBP1-213ENST00000496622 IGKV1-9A0A0C4DH69 117 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 SMCO3A2RU48 225 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ZNF705GA8MUZ8 300 aaPredicted RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 RPL36A-HNRNPH2H7BZ11 118 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 GLSO94925 669 aaPredicted RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 CD1AP06126 327 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 CXCL2P19875 107 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ACKR3P25106 362 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 MPZP25189 248 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 FKBP2P26885 142 aaKnown RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 PSG4Q00888 419 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 GNMTQ14749 295 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 RAB35Q15286 201 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 WDR25Q64LD2 544 aaPredicted RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 PRR27Q6MZM9 219 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 STEAP1BQ6NZ63 245 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 HIST3H2BBQ8N257 126 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 C17orf78Q8N4C9 275 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 BOLLQ8N9W6 283 aaKnown RBP5.27□□□□□ -1.57
SSBP1-213ENST00000496622 OR2AK2Q8NG84 335 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 OR8S1Q8NH09 359 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 PRDM14Q9GZV8 571 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 NOX3Q9HBY0 568 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 ABRACLQ9P1F3 81 aa5.27□□□□□ -1.57
SSBP1-213ENST00000496622 DKK4Q9UBT3 224 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms