RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 LEUTXA8MZ59 168 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 J3QR06 171 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 FABP7O15540 132 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 IGHV3-43DP0DP04 118 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 HLA-DRB5Q30154 266 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 Q6ZS49 121 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 SIGLECL1Q8N7X8 197 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 OR4A4PQ8NGN8 299 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 MALSU1Q96EH3 234 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 DCUN1D5Q9BTE7 237 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 SLIRPQ9GZT3 109 aaKnown RBP13.9□□□□□ -0.18
HDAC6-235ENST00000495515 MMP28Q9H239 520 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 PRDM13Q9H4Q3 707 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 DPM3Q9P2X0 92 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 ELF5Q9UKW6 265 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-235ENST00000495515 MRPS7Q9Y2R9 242 aaKnown RBP13.9□□□□□ -0.18
HDAC6-235ENST00000495515 KIAA2026Q5HYC2 2103 aa13.9□□□□□ -0.18
HDAC6-235ENST00000495515 HSPA12AO43301 675 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 YPEL1O60688 119 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 TPPPO94811 219 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 DIRAS3O95661 229 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 IGLV1-47P01700 117 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 SCTP09683 121 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 ZBTB25P24278 435 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 PRSS3P35030 304 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 GNG10P50151 68 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 TUSC1Q2TAM9 212 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 Q6ZPA2 131 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 LINC00311Q8N616 119 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 OR10V1Q8NGI7 309 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 OR4P4Q8NGL7 312 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 OR10X1Q8NGY0 326 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 LEAP2Q969E1 77 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 YPEL2Q96QA6 119 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 ST6GALNAC5Q9BVH7 336 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 EXTL2Q9UBQ6 330 aa13.89□□□□□ -0.19
HDAC6-235ENST00000495515 ZNF230Q9UIE0 474 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-235ENST00000495515 SOX21Q9Y651 276 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-235ENST00000495515 BUB1B-PAK6H3BSN5 160 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 CTDSP2O14595 271 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 IGHV3-7P01780 117 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 IL3RAP26951 378 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 ARHGDIBP52566 201 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 HILS1P60008 231 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 BAMBIQ13145 260 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 MORN2Q502X0 79 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 LY6G6FQ5SQ64 297 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 Q6YL49 198 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 LDLRAD3Q86YD5 345 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 DTX3Q8N9I9 347 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 OR52L2PQ8NGH6 319 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 ZNF48Q96MX3 618 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-235ENST00000495515 OCSTAMPQ9BR26 566 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 MMP27Q9H306 513 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 DPAGT1Q9H3H5 408 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 RABL2AQ9UBK7 228 aaPredicted RBP13.88□□□□□ -0.19
HDAC6-235ENST00000495515 SLC23A1Q9UHI7 598 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 RABL2BQ9UNT1 228 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 A3GALT2U3KPV4 340 aa13.88□□□□□ -0.19
HDAC6-235ENST00000495515 MDFIC2A0A1B0GVS7 189 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 BTBD17A6NE02 478 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 OOSP1A8MZH6 123 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 SSX5O60225 188 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 CTXN2P0C2S0 81 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 PPP1CCP36873 323 aaKnown RBP13.87□□□□□ -0.19
HDAC6-235ENST00000495515 MADCAM1Q13477 382 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 SSX2Q16385 188 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 AANATQ16613 207 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 CCDC144NLQ6NUI1 221 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 LHFPL4Q7Z7J7 247 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 LAX1Q8IWV1 398 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 OR2AK2Q8NG84 335 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 SSMEM1Q8WWF3 244 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 EDARADDQ8WWZ3 215 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 MAFIPQ8WZ33 124 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 DIRAS2Q96HU8 199 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 NXF2Q9GZY0 626 aaKnown RBP13.87□□□□□ -0.19
HDAC6-235ENST00000495515 MEGF9Q9H1U4 602 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 SCPEP1Q9HB40 452 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 IFT46Q9NQC8 304 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 ZNRD1Q9P1U0 126 aa13.87□□□□□ -0.19
HDAC6-235ENST00000495515 HLA-DQB1P01920 261 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 LPLP06858 475 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 GSTT2P0CG29 244 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 GSTT2BP0CG30 244 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 S100A5P33763 92 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 CEACAM6P40199 344 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 GNMTQ14749 295 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 UTF1Q5T230 341 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 CNIH2Q6PI25 160 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 SLC25A48Q6ZT89 311 aaKnown RBP13.86□□□□□ -0.19
HDAC6-235ENST00000495515 HOGA1Q86XE5 327 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 SNX29P2Q8IUI4 249 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 TMEM86BQ8N661 226 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 OR10J5Q8NHC4 309 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 RPEQ96AT9 228 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 CABLES2Q9BTV7 478 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 ABHD14AQ9BUJ0 271 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 MIXL1Q9H2W2 232 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 BATF3Q9NR55 127 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms