RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PPP1CCP36873 323 aaKnown RBP15.7■□□□□ 0.1
HDAC4-212ENST00000495497 HLA-DRB3P79483 266 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 LY6EQ16553 131 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 UBE2NLQ5JXB2 153 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 MOB1BQ7L9L4 216 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 ZNF554Q86TJ5 538 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 IL1F10Q8WWZ1 152 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 PHF21AQ96BD5 680 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 GALMQ96C23 342 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 KCTD12Q96CX2 325 aaKnown RBP15.7■□□□□ 0.1
HDAC4-212ENST00000495497 ABCG5Q9H222 651 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 CEPT1Q9Y6K0 416 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 LEUTXA8MZ59 168 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 LY6LH3BQJ8 138 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 CLDN34H7C241 214 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 SCGNO76038 276 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 EIF4EP06730 217 aaKnown RBP15.69■□□□□ 0.1
HDAC4-212ENST00000495497 PTHLHP12272 177 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 ZNF134P52741 427 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 DIAPH2-AS1Q14236 149 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 LRRC75BQ2VPJ9 315 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 TPTE2P1Q5T6R2 138 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 HACD4Q5VWC8 232 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 TMEM86BQ8N661 226 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 ZNF439Q8NDP4 499 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 NUDCD2Q8WVJ2 157 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 TMEM158Q8WZ71 300 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 ISOC1Q96CN7 298 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 DPAGT1Q9H3H5 408 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.69■□□□□ 0.1
HDAC4-212ENST00000495497 POMT1Q9Y6A1 747 aa15.69■□□□□ 0.1
HDAC4-212ENST00000495497 TRDCB7Z8K6 153 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 H3BMQ9 156 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 GSTP1P09211 210 aaKnown RBP15.68■□□□□ 0.1
HDAC4-212ENST00000495497 ZNF182P17025 639 aaPredicted RBP15.68■□□□□ 0.1
HDAC4-212ENST00000495497 TALDO1P37837 337 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 HTD2P86397 168 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 MORN2Q502X0 79 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 CT45A1Q5HYN5 189 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 C16orf87Q6PH81 154 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 OR10X1Q8NGY0 326 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 CT45A3Q8NHU0 189 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 PIFOQ8TCI5 191 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 FAM216AQ8WUB2 273 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 C19orf24Q9BVV8 132 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 DIABLOQ9NR28 239 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 JPT1Q9UK76 154 aa15.68■□□□□ 0.1
HDAC4-212ENST00000495497 IGKV1D-8A0A087WSZ0 117 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 IGKV1-6A0A0C4DH72 117 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 SSX5O60225 188 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 HPGDSO60760 199 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 NOL3O60936 208 aaKnown RBP15.67■□□□□ 0.1
HDAC4-212ENST00000495497 GSTT2P0CG29 244 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 GSTT2BP0CG30 244 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 ARL6IP1Q15041 203 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 TMEM30BQ3MIR4 351 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 LINC00311Q8N616 119 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 ZFAND2BQ8WV99 257 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 S100A16Q96FQ6 103 aaKnown RBP15.67■□□□□ 0.1
HDAC4-212ENST00000495497 BCL7BQ9BQE9 202 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 OR1A1Q9P1Q5 309 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 MGAT4AQ9UM21 535 aa15.67■□□□□ 0.1
HDAC4-212ENST00000495497 AMMECR1Q9Y4X0 333 aaPredicted RBP15.67■□□□□ 0.1
HDAC4-212ENST00000495497 BTBD17A6NE02 478 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 FAM181BA6NEQ2 426 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 CCDC160A6NGH7 325 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 CD24P25063 80 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 GNG2P59768 71 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 MADCAM1Q13477 382 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 SLC25A48Q6ZT89 311 aaKnown RBP15.66■□□□□ 0.1
HDAC4-212ENST00000495497 ACOT12Q8WYK0 555 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 CREB3L1Q96BA8 519 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 OCSTAMPQ9BR26 566 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 ST6GALNAC5Q9BVH7 336 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 PARP12Q9H0J9 701 aaKnown RBP15.66■□□□□ 0.1
HDAC4-212ENST00000495497 AUNIPQ9H7T9 357 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 ABCB10Q9NRK6 738 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 SLC23A1Q9UHI7 598 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 VPREB3Q9UKI3 123 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 ATRQ13535 2644 aa15.66■□□□□ 0.1
HDAC4-212ENST00000495497 A0A0A6YYH2 397 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 A6NJ64 397 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 POM121CA8CG34 1229 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 VGLL3A8MV65 326 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 FABP7O15540 132 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 XRCC3O43542 346 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 GPR137BO60478 399 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 YPEL1O60688 119 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 ELK1P19419 428 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 CEACAM3P40198 252 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 REG1BP48304 166 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 ACTG1P63261 375 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 HERPUD1Q15011 391 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 AANATQ16613 207 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 PNLIPRP3Q17RR3 467 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 Q3ZCU0 254 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 IGSF11Q5DX21 431 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 C8orf31Q8N9H6 132 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 OR5R1Q8NH85 324 aa15.65■□□□□ 0.1
HDAC4-212ENST00000495497 DYNC2LI1Q8TCX1 351 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms