RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 CTSEP14091 401 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 LPAR6P43657 344 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 SULT1A2P50226 295 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 OR2B6P58173 313 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 OR10A3P58181 314 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 RAB31Q13636 194 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 FAM229BQ4G0N7 80 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 HENMT1Q5T8I9 393 aaKnown RBP1.19□□□□□ -2.22
VPS50-219ENST00000495039 TMEM25Q86YD3 366 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 ZNRF2Q8NHG8 242 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 SUN5Q8TC36 379 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 ZNF75CPQ92670 426 aaPredicted RBP1.19□□□□□ -2.22
VPS50-219ENST00000495039 CCDC127Q96BQ5 260 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 AGPAT3Q9NRZ7 376 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 FAM206AQ9NX38 181 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 ENPP5Q9UJA9 477 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 SCML1Q9UN30 329 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 FIS1Q9Y3D6 152 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 MINOS1-NBL1R4GNA1 71 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 ADGRB3O60242 1522 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 KIAA0232Q92628 1395 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 GBF1Q92538 1859 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 VPS37CA5D8V6 355 aaPredicted RBP1.18□□□□□ -2.22
VPS50-219ENST00000495039 C19orf71A6NCJ1 209 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 H3BSA7 217 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 SULT1C2O00338 296 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 TNFAIP8O95379 198 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 SOD1P00441 154 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 GADD45AP24522 165 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 MAGEA6P43360 314 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 KCNJ3P48549 501 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 SLC35A2P78381 396 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 PRDX4Q13162 271 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 SS18Q15532 418 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 OR4D1Q15615 310 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 KRTAP5-10Q6L8G5 202 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 TTC33Q6PID6 262 aaPredicted RBP1.18□□□□□ -2.22
VPS50-219ENST00000495039 VN1R4Q7Z5H5 301 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 MTERF4Q7Z6M4 381 aaKnown RBP1.18□□□□□ -2.22
VPS50-219ENST00000495039 OR4P4Q8NGL7 312 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 OR10A6Q8NH74 314 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 PPWD1Q96BP3 646 aaKnown RBP1.18□□□□□ -2.22
VPS50-219ENST00000495039 SERPINB11Q96P15 392 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 MED18Q9BUE0 208 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 SMDT1Q9H4I9 107 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 POFUT2Q9Y2G5 429 aa1.18□□□□□ -2.22
VPS50-219ENST00000495039 USP42Q9H9J4 1324 aaKnown RBP1.17□□□□□ -2.22
VPS50-219ENST00000495039 TRPM6Q9BX84 2022 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 PHYHO14832 338 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 GZMBP10144 247 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 PPP1CCP36873 323 aaKnown RBP1.17□□□□□ -2.22
VPS50-219ENST00000495039 PDGFRLQ15198 375 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 TMEM249Q2WGJ8 235 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 MRPL51Q4U2R6 128 aaKnown RBP1.17□□□□□ -2.22
VPS50-219ENST00000495039 CENPWQ5EE01 88 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 AADACL4Q5VUY2 407 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 OR11H1Q8NG94 326 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 OR5K1Q8NHB7 308 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 MBOAT7Q96N66 472 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 HBEGFQ99075 208 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 MGLLQ99685 303 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 UPK3BQ9BT76 320 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 MND1Q9BWT6 205 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 CHST5Q9GZS9 411 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 GTSF1LQ9H1H1 148 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 TXNL4BQ9NX01 149 aaKnown RBP1.17□□□□□ -2.22
VPS50-219ENST00000495039 TMEM216Q9P0N5 145 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 ALG5Q9Y673 324 aa1.17□□□□□ -2.22
VPS50-219ENST00000495039 ADAMTSL1Q8N6G6 1762 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 GOLGA8QA0A0J9YX86 632 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 M0QYV0 167 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 UGT2B11O75310 529 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 LIMS3P0CW19 117 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 LIMS4P0CW20 117 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 IGHV3-30-3P0DP02 117 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 SLC25A16P16260 332 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 CD36P16671 472 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 ORM2P19652 201 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 GTF2BQ00403 316 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 HES1Q14469 280 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 TRMT12Q53H54 448 aaKnown RBP1.16□□□□□ -2.22
VPS50-219ENST00000495039 TIMM23BQ5SRD1 257 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 DOLPP1Q86YN1 238 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 YIPF7Q8N8F6 280 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 ANGPTL6Q8NI99 470 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 DCANP1Q8TF63 244 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 CCDC12Q8WUD4 166 aaPredicted RBP1.16□□□□□ -2.22
VPS50-219ENST00000495039 RORBQ92753 470 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 TMBIM1Q969X1 311 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 TAMM41Q96BW9 452 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 OR52B2Q96RD2 323 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 CYTH2Q99418 400 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 UGT2B28Q9BY64 529 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 DNAJC12Q9UKB3 198 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 PSMD13Q9UNM6 376 aa1.16□□□□□ -2.22
VPS50-219ENST00000495039 NUP153P49790 1475 aaKnown RBP1.16□□□□□ -2.22
VPS50-219ENST00000495039 IGHV3-73A0A0B4J1V6 119 aa1.15□□□□□ -2.23
VPS50-219ENST00000495039 MUC21A0A0G2JKD1 596 aa1.15□□□□□ -2.23
VPS50-219ENST00000495039 MUC21A0A140T8X8 626 aa1.15□□□□□ -2.23
VPS50-219ENST00000495039 LINC00862A6NCI5 91 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms