RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 ZNF69Q9UC07 566 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 ANAPC10Q9UM13 185 aa12.24□□□□□ -0.45
ACTB-213ENST00000493945 RBM7Q9Y580 266 aaKnown RBP12.24□□□□□ -0.45
ACTB-213ENST00000493945 A0A087X0M5 115 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 TRAV40A0A0B4J280 105 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 A0A1B0GX30 115 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 MEX3AA1L020 520 aaKnown RBP12.23□□□□□ -0.45
ACTB-213ENST00000493945 MEIOCA2RUB1 952 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 CENPXA8MT69 81 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 YPEL1O60688 119 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 PTHLHP12272 177 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 NAT1P18440 290 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 OMGP23515 440 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 CD34P28906 385 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 SRP14P37108 136 aaKnown RBP12.23□□□□□ -0.45
ACTB-213ENST00000493945 UBE2E1P51965 193 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 TSPAN5P62079 268 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 DGCR2P98153 550 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 LY6G6FQ5SQ64 297 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 C8orf31Q8N9H6 132 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 TMEM229BQ8NBD8 167 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 OR1L1Q8NH94 360 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 MAFIPQ8WZ33 124 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 YPEL2Q96QA6 119 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 SUCNR1Q9BXA5 334 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 TMPRSS13Q9BYE2 586 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 AKIP1Q9NQ31 210 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 EHFQ9NZC4 300 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 ELF5Q9UKW6 265 aaPredicted RBP12.23□□□□□ -0.45
ACTB-213ENST00000493945 TEX15Q9BXT5 2789 aa12.23□□□□□ -0.45
ACTB-213ENST00000493945 IGHV2-26A0A0B4J1V2 119 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 DISC1C4P0D8 188 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 ITGB1BP1O14713 200 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 SLC22A5O76082 557 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 SCTP09683 121 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 GSTT2P0CG29 244 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 AKAIN1P0CW23 69 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 MMP9P14780 707 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 COX7A1P24310 79 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 PPP5CP53041 499 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 HERV-K104P61576 105 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 ZNF79Q15937 498 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 ZNF57Q68EA5 555 aaPredicted RBP12.22□□□□□ -0.45
ACTB-213ENST00000493945 ABHD12Q8N2K0 398 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 GVQW1Q8N7I0 195 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 BEND2Q8NDZ0 799 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 OR10X1Q8NGY0 326 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 LHX4Q969G2 390 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 CDC42EP3Q9UKI2 254 aa12.22□□□□□ -0.45
ACTB-213ENST00000493945 RBMX2Q9Y388 322 aaKnown RBP12.22□□□□□ -0.45
ACTB-213ENST00000493945 TBL2Q9Y4P3 447 aaKnown RBP12.22□□□□□ -0.45
ACTB-213ENST00000493945 OTOGQ6ZRI0 2925 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 TRBV6-7A0A0A0MS04 114 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 FAM172BPA6NC97 362 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 ARG1P05089 322 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 OR5H8P0DN80 308 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 HOXB4P17483 251 aaPredicted RBP12.21□□□□□ -0.45
ACTB-213ENST00000493945 HLA-DMAP28067 261 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 S100GP29377 79 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 HRH1P35367 487 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 CEACAM6P40199 344 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 ECI1P42126 302 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 MIDNQ504T8 468 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 VAX1Q5SQQ9 334 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 PNKDQ8N490 385 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 ARRDC1Q8N5I2 433 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 Q8N7P7 452 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 OR11H6Q8NGC7 330 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 TBX15Q96SF7 602 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 ABHD14AQ9BUJ0 271 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 KLK11Q9UBX7 282 aa12.21□□□□□ -0.45
ACTB-213ENST00000493945 CSMD1Q96PZ7 3565 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 IGHV3-43A0A0B4J1X8 118 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 TXNL1O43396 289 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 RAB3DO95716 219 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 IGHV3-43DP0DP04 118 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 GNG10P50151 68 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 PLA1AQ53H76 456 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 MINOS1Q5TGZ0 78 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 CCDC144NLQ6NUI1 221 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 STEAP1BQ6NZ63 245 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 MFSD4AQ8N468 514 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 LINC00311Q8N616 119 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 OR10V1Q8NGI7 309 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 OR6F1Q8NGZ6 308 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 SNAPC3Q92966 411 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 PRRT1Q99946 306 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 C7orf50Q9BRJ6 194 aaKnown RBP12.2□□□□□ -0.46
ACTB-213ENST00000493945 MS4A7Q9GZW8 240 aaPredicted RBP12.2□□□□□ -0.46
ACTB-213ENST00000493945 TOLLIPQ9H0E2 274 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 MMP28Q9H239 520 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 PIPOXQ9P0Z9 390 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 SCP2D1Q9UJQ7 156 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 ZNF221Q9UK13 617 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 NUP50Q9UKX7 468 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 FAM96BQ9Y3D0 163 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 MINOS1-NBL1R4GNA1 71 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 CSPG4Q6UVK1 2322 aa12.2□□□□□ -0.46
ACTB-213ENST00000493945 HIVEP2P31629 2446 aa12.19□□□□□ -0.46
ACTB-213ENST00000493945 AKAP9Q99996 3911 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms