RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 SHARPINQ9H0F6 387 aa5.42□□□□□ -1.54
TRA2B-216ENST00000493864 PPA2Q9H2U2 334 aa5.42□□□□□ -1.54
TRA2B-216ENST00000493864 MYOZ1Q9NP98 299 aaPredicted RBP5.42□□□□□ -1.54
TRA2B-216ENST00000493864 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.42□□□□□ -1.54
TRA2B-216ENST00000493864 DUX4Q9UBX2 424 aa5.42□□□□□ -1.54
TRA2B-216ENST00000493864 DOCK11Q5JSL3 2073 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 TRAV39A0A0B4J263 110 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 ISPDA4D126 451 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 HMX3A6NHT5 357 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 FAM90A9PA6NNJ1 464 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 GABARAPH6UMI1 98 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 K7N7A8 449 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 CTDSPLO15194 276 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 SIGLEC5O15389 551 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 GSTZ1O43708 216 aaPredicted RBP5.41□□□□□ -1.54
TRA2B-216ENST00000493864 ORC5O43913 435 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 CA11O75493 328 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 FSTL3O95633 263 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 MT-ND4P03905 459 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 TK1P04183 234 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 WNT2P09544 360 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 CD3GP09693 182 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 CSF3P09919 207 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 GIFP27352 417 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 CD40LGP29965 261 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 MDH2P40926 338 aaKnown RBP5.41□□□□□ -1.54
TRA2B-216ENST00000493864 GPR6P46095 362 aaPredicted RBP5.41□□□□□ -1.54
TRA2B-216ENST00000493864 GLIPR1P48060 266 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 PDLIM4P50479 330 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 GNG2P59768 71 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 IFITM3Q01628 133 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 AESQ08117 197 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 ARFRP1Q13795 201 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 ATXN7L3Q14CW9 347 aaPredicted RBP5.41□□□□□ -1.54
TRA2B-216ENST00000493864 PNLIPRP3Q17RR3 467 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 DEFB113Q30KQ7 82 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 TRAPPC6BQ86SZ2 158 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 Q8N402 240 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 GVQW1Q8N7I0 195 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 FAM216BQ8N7L0 139 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 GDPD1Q8N9F7 314 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 GPX8Q8TED1 209 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 C15orf40Q8WUR7 153 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 GLMPQ8WWB7 406 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 FCAMRQ8WWV6 532 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 TIMD4Q96H15 378 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 MED30Q96HR3 178 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 CMSS1Q9BQ75 279 aaKnown RBP5.41□□□□□ -1.54
TRA2B-216ENST00000493864 DCTN5Q9BTE1 182 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 ST6GALNAC5Q9BVH7 336 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 ELOVL1Q9BW60 279 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 DNTTIP1Q9H147 329 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 NARFLQ9H6Q4 476 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 ZNF665Q9H7R5 613 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 SPACA1Q9HBV2 294 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 RABL2AQ9UBK7 228 aaPredicted RBP5.41□□□□□ -1.54
TRA2B-216ENST00000493864 KLK11Q9UBX7 282 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 ZNF230Q9UIE0 474 aaPredicted RBP5.41□□□□□ -1.54
TRA2B-216ENST00000493864 RABL2BQ9UNT1 228 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 WNK2Q9Y3S1 2297 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 ARHGAP32A7KAX9 2087 aa5.41□□□□□ -1.54
TRA2B-216ENST00000493864 NIPBLQ6KC79 2804 aaeCLIP5.4□□□□□ -1.54
TRA2B-216ENST00000493864 IGKV1D-8A0A087WSZ0 117 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 LINC00854A0A1B0GVQ3 168 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 MEX3AA1L020 520 aaKnown RBP5.4□□□□□ -1.54
TRA2B-216ENST00000493864 CEACAM18A8MTB9 384 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 SERPINE3A8MV23 424 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 SULT1C2O00338 296 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 DVL1O14640 695 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 NDUFA2O43678 99 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 RBBP9O75884 186 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 NAPSAO96009 420 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 IL7P13232 177 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 RCC1P18754 421 aaPredicted RBP5.4□□□□□ -1.54
TRA2B-216ENST00000493864 RBM39Q14498 530 aaKnown RBP5.4□□□□□ -1.54
TRA2B-216ENST00000493864 ARL6IP1Q15041 203 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 GRK1Q15835 563 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 KCNJ8Q15842 424 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 TMEM155Q4W5P6 130 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 RSBN1Q5VWQ0 802 aaPredicted RBP5.4□□□□□ -1.54
TRA2B-216ENST00000493864 SLC35E4Q6ICL7 350 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 ZNF841Q6ZN19 808 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 ZNF497Q6ZNH5 498 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 SLC36A1Q7Z2H8 476 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 ZNF561Q8N587 486 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 TPRX1Q8N7U7 411 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 TMEM185AQ8NFB2 350 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 OR5D13Q8NGL4 314 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 OR4K15Q8NH41 348 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 MRPL30Q8TCC3 161 aaKnown RBP5.4□□□□□ -1.54
TRA2B-216ENST00000493864 C10orf105Q8TEF2 133 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 CCDC107Q8WV48 283 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 SMIM4Q8WVI0 70 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 MAFIPQ8WZ33 124 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 DPF1Q92782 380 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 COQ2Q96H96 371 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 SCPEP1Q9HB40 452 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 CHMP1AQ9HD42 196 aaPredicted RBP5.4□□□□□ -1.54
TRA2B-216ENST00000493864 ABCB10Q9NRK6 738 aa5.4□□□□□ -1.54
TRA2B-216ENST00000493864 BEX4Q9NWD9 120 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms