RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 NKAIN3Q8N8D7 197 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 OR5M8Q8NGP6 311 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 OR1L1Q8NH94 360 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 CT45A3Q8NHU0 189 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 THRSPQ92748 146 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 DERL3Q96Q80 235 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 SELENOIQ9C0D9 397 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 ZNF580Q9UK33 172 aa13.04□□□□□ -0.32
PTPRU-208ENST00000493601 PNMA8CA0A1B0GUJ8 204 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 A0A1W2PPK0 400 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 EFCAB10A6NFE3 127 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 ZNF736B4DX44 427 aaPredicted RBP13.03□□□□□ -0.32
PTPRU-208ENST00000493601 EBAG9O00559 213 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 LANCL1O43813 399 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 RAMP3O60896 148 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 CRTAPO75718 401 aaPredicted RBP13.03□□□□□ -0.32
PTPRU-208ENST00000493601 IGHG4P01861 327 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 MAS1P04201 325 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 GLAP06280 429 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 OR5H8P0DN80 308 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 FUT3P21217 361 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 ZNF134P52741 427 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 F2RL1P55085 397 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 CFHR3Q02985 330 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 LSAMPQ13449 338 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 KIR2DS1Q14954 304 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 LRRC36Q1X8D7 754 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 DEFB136Q30KP8 78 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 LCNL1Q6ZST4 164 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 ZNF554Q86TJ5 538 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 PACRGLQ8N7B6 248 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 C4orf3Q8WVX3 66 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 Q96M66 194 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 HSPB9Q9BQS6 159 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 BANF2Q9H503 90 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 OR2S2Q9NQN1 319 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 KCNIP1Q9NZI2 227 aa13.03□□□□□ -0.32
PTPRU-208ENST00000493601 MYL12BO14950 172 aa13.02□□□□□ -0.33
PTPRU-208ENST00000493601 IGF1P05019 195 aa13.02□□□□□ -0.33
PTPRU-208ENST00000493601 RCC1P18754 421 aaPredicted RBP13.02□□□□□ -0.33
PTPRU-208ENST00000493601 MAPK3P27361 379 aaPredicted RBP13.02□□□□□ -0.33
PTPRU-208ENST00000493601 MMDQ15546 238 aa13.02□□□□□ -0.33
PTPRU-208ENST00000493601 DHRSXQ8N5I4 330 aa13.02□□□□□ -0.33
PTPRU-208ENST00000493601 TFAP2CQ92754 450 aa13.02□□□□□ -0.33
PTPRU-208ENST00000493601 GGHQ92820 318 aa13.02□□□□□ -0.33
PTPRU-208ENST00000493601 UQCC2Q9BRT2 126 aa13.02□□□□□ -0.33
PTPRU-208ENST00000493601 ABHD14AQ9BUJ0 271 aa13.02□□□□□ -0.33
PTPRU-208ENST00000493601 TAF9BQ9HBM6 251 aa13.02□□□□□ -0.33
PTPRU-208ENST00000493601 MBNL3Q9NUK0 354 aaKnown RBP13.02□□□□□ -0.33
PTPRU-208ENST00000493601 CNOT2Q9NZN8 540 aaKnown RBP13.02□□□□□ -0.33
PTPRU-208ENST00000493601 ZNF107Q9UII5 783 aaPredicted RBP13.02□□□□□ -0.33
PTPRU-208ENST00000493601 JPT1Q9UK76 154 aa13.02□□□□□ -0.33
PTPRU-208ENST00000493601 UBE2QL1A1L167 161 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 PDCD6O75340 191 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 CD1AP06126 327 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 CELP19835 753 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 MYF6P23409 242 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 LUMP51884 338 aaPredicted RBP13.01□□□□□ -0.33
PTPRU-208ENST00000493601 C9orf66Q5T8R8 295 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 KCTD7Q96MP8 289 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 WWC2-AS2Q96NR7 200 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 CHCHD6Q9BRQ6 235 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 CST11Q9H112 138 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 GHRLQ9UBU3 117 aa13.01□□□□□ -0.33
PTPRU-208ENST00000493601 SLC2A2P11168 524 aaPredicted RBP13□□□□□ -0.33
PTPRU-208ENST00000493601 PSMB8P28062 276 aa13□□□□□ -0.33
PTPRU-208ENST00000493601 VHLP40337 213 aa13□□□□□ -0.33
PTPRU-208ENST00000493601 WNT4P56705 351 aa13□□□□□ -0.33
PTPRU-208ENST00000493601 ADARB1P78563 741 aaKnown RBP13□□□□□ -0.33
PTPRU-208ENST00000493601 GNMTQ14749 295 aa13□□□□□ -0.33
PTPRU-208ENST00000493601 MORN2Q502X0 79 aa13□□□□□ -0.33
PTPRU-208ENST00000493601 SIGIRRQ6IA17 410 aa13□□□□□ -0.33
PTPRU-208ENST00000493601 LYPD6Q86Y78 171 aa13□□□□□ -0.33
PTPRU-208ENST00000493601 C8orf59Q8N0T1 100 aaPredicted RBP13□□□□□ -0.33
PTPRU-208ENST00000493601 FAM46BQ96A09 425 aa13□□□□□ -0.33
PTPRU-208ENST00000493601 KMT2CQ8NEZ4 4911 aaKnown RBP13□□□□□ -0.33
PTPRU-208ENST00000493601 DNAH9Q9NYC9 4486 aa13□□□□□ -0.33
PTPRU-208ENST00000493601 SEC14L6B5MCN3 397 aa12.99□□□□□ -0.33
PTPRU-208ENST00000493601 RGS11O94810 467 aa12.99□□□□□ -0.33
PTPRU-208ENST00000493601 UBBP0CG47 229 aa12.99□□□□□ -0.33
PTPRU-208ENST00000493601 PPP1CCP36873 323 aaKnown RBP12.99□□□□□ -0.33
PTPRU-208ENST00000493601 HTD2P86397 168 aa12.99□□□□□ -0.33
PTPRU-208ENST00000493601 FHL3Q13643 280 aa12.99□□□□□ -0.33
PTPRU-208ENST00000493601 AHSA2Q719I0 299 aa12.99□□□□□ -0.33
PTPRU-208ENST00000493601 MRPL30Q8TCC3 161 aaKnown RBP12.99□□□□□ -0.33
PTPRU-208ENST00000493601 PSORS1C1Q9UIG5 152 aa12.99□□□□□ -0.33
PTPRU-208ENST00000493601 HLA-DRB1P01911 266 aa12.98□□□□□ -0.33
PTPRU-208ENST00000493601 ACTBP60709 375 aa12.98□□□□□ -0.33
PTPRU-208ENST00000493601 NKAPLQ5M9Q1 402 aa12.98□□□□□ -0.33
PTPRU-208ENST00000493601 TMEM65Q6PI78 240 aa12.98□□□□□ -0.33
PTPRU-208ENST00000493601 OR52L2PQ8NGH6 319 aa12.98□□□□□ -0.33
PTPRU-208ENST00000493601 MYOZ3Q8TDC0 251 aa12.98□□□□□ -0.33
PTPRU-208ENST00000493601 GALMQ96C23 342 aa12.98□□□□□ -0.33
PTPRU-208ENST00000493601 RBMXL1Q96E39 390 aaKnown RBP12.98□□□□□ -0.33
PTPRU-208ENST00000493601 ZNF251Q9BRH9 671 aa12.98□□□□□ -0.33
PTPRU-208ENST00000493601 MRPL20Q9BYC9 149 aaKnown RBP12.98□□□□□ -0.33
PTPRU-208ENST00000493601 LRRC42Q9Y546 428 aa12.98□□□□□ -0.33
PTPRU-208ENST00000493601 NBR2O15453 112 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 YPEL1O60688 119 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 GNAO1P09471 354 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms