RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 GPX5O75715 221 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 SLC2A2P11168 524 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-231ENST00000488905 MYF6P23409 242 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 ECI1P42126 302 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 MMDQ15546 238 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 YIF1BQ5BJH7 314 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 DMKNQ6E0U4 476 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-231ENST00000488905 C10orf67Q8IYJ2 551 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 PQLC1Q8N2U9 271 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 JAGN1Q8N5M9 183 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 ZNF555Q8NEP9 628 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 MYOZ3Q8TDC0 251 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 GHSRQ92847 366 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 MRPS24Q96EL2 167 aaKnown RBP14.38□□□□□ -0.11
HDAC6-231ENST00000488905 SCOCQ9UIL1 159 aa14.38□□□□□ -0.11
HDAC6-231ENST00000488905 EXOSC1Q9Y3B2 195 aaKnown RBP14.38□□□□□ -0.11
HDAC6-231ENST00000488905 LANCL1O43813 399 aa14.37□□□□□ -0.11
HDAC6-231ENST00000488905 SC5DO75845 299 aa14.37□□□□□ -0.11
HDAC6-231ENST00000488905 RCC1P18754 421 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-231ENST00000488905 RPS11P62280 158 aaKnown RBP eCLIP14.37□□□□□ -0.11
HDAC6-231ENST00000488905 AWAT2Q6E213 333 aa14.37□□□□□ -0.11
HDAC6-231ENST00000488905 GLIPR1L1Q6UWM5 242 aa14.37□□□□□ -0.11
HDAC6-231ENST00000488905 OR11H1Q8NG94 326 aa14.37□□□□□ -0.11
HDAC6-231ENST00000488905 PGLYRP3Q96LB9 341 aa14.37□□□□□ -0.11
HDAC6-231ENST00000488905 S100A14Q9HCY8 104 aa14.37□□□□□ -0.11
HDAC6-231ENST00000488905 SMPD3Q9NY59 655 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-231ENST00000488905 CLEC2DQ9UHP7 191 aa14.37□□□□□ -0.11
HDAC6-231ENST00000488905 CA11O75493 328 aa14.36□□□□□ -0.11
HDAC6-231ENST00000488905 ADARB1P78563 741 aaKnown RBP14.36□□□□□ -0.11
HDAC6-231ENST00000488905 ZNF260Q3ZCT1 412 aa14.36□□□□□ -0.11
HDAC6-231ENST00000488905 STEAP3Q658P3 488 aa14.36□□□□□ -0.11
HDAC6-231ENST00000488905 ZFP41Q8N8Y5 198 aa14.36□□□□□ -0.11
HDAC6-231ENST00000488905 RDH12Q96NR8 316 aa14.36□□□□□ -0.11
HDAC6-231ENST00000488905 OR14A2Q96R54 314 aa14.36□□□□□ -0.11
HDAC6-231ENST00000488905 CHCHD6Q9BRQ6 235 aa14.36□□□□□ -0.11
HDAC6-231ENST00000488905 ABHD14AQ9BUJ0 271 aa14.36□□□□□ -0.11
HDAC6-231ENST00000488905 ZNF256Q9Y2P7 627 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-231ENST00000488905 PEX16Q9Y5Y5 336 aa14.36□□□□□ -0.11
HDAC6-231ENST00000488905 TRBV5-7A0A0A0MS05 114 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 FAM90A10PA6NDY2 464 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 FAM90A7PA6NKC0 464 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 FAM90A23PA8MXZ1 464 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 MGMTP16455 207 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 GNMTQ14749 295 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 Q96M66 194 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 SELENOIQ9C0D9 397 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 BANF2Q9H503 90 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 GNB4Q9HAV0 340 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 TAF9BQ9HBM6 251 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 OR2S2Q9NQN1 319 aa14.35□□□□□ -0.11
HDAC6-231ENST00000488905 MBNL3Q9NUK0 354 aaKnown RBP14.35□□□□□ -0.11
HDAC6-231ENST00000488905 A0A1W2PPK0 400 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 ATP6V0E1O15342 81 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 CRTAPO75718 401 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-231ENST00000488905 HLA-DRB1P01911 266 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 OR8U8P0C7N1 319 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 PPIFP30405 207 aaKnown RBP14.34□□□□□ -0.11
HDAC6-231ENST00000488905 ACTBP60709 375 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 MED21Q13503 144 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 MORN2Q502X0 79 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 ZNF485Q8NCK3 441 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 CYYR1Q96J86 154 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 UBE2E2Q96LR5 201 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 MRPL20Q9BYC9 149 aaKnown RBP14.34□□□□□ -0.11
HDAC6-231ENST00000488905 CHCHD3Q9NX63 227 aaKnown RBP14.34□□□□□ -0.11
HDAC6-231ENST00000488905 JPT1Q9UK76 154 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 SACSQ9NZJ4 4579 aa14.34□□□□□ -0.11
HDAC6-231ENST00000488905 UBE2QL1A1L167 161 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 G3V318 75 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 I3L521 148 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 MAS1P04201 325 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 GLAP06280 429 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 FUT3P21217 361 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 PPP1CCP36873 323 aaKnown RBP14.33□□□□□ -0.12
HDAC6-231ENST00000488905 INSL3P51460 131 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 RUNX1Q01196 453 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 ZNF616Q08AN1 781 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 ASPHD1Q5U4P2 390 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 SIGIRRQ6IA17 410 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 TMEM65Q6PI78 240 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 ZNF554Q86TJ5 538 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 LYPD6Q86Y78 171 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 CDH26Q8IXH8 852 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 ODF3L1Q8IXM7 274 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 ZNF491Q8N8L2 437 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 OR52L2PQ8NGH6 319 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 MRPL30Q8TCC3 161 aaKnown RBP14.33□□□□□ -0.12
HDAC6-231ENST00000488905 TMEM80Q96HE8 168 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 ASCL2Q99929 193 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 KLK15Q9H2R5 256 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 OR51J1Q9H342 316 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 PARP11Q9NR21 331 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 KCNIP1Q9NZI2 227 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 VSIG4Q9Y279 399 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 WSB1Q9Y6I7 421 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 RYR2Q92736 4967 aa14.33□□□□□ -0.12
HDAC6-231ENST00000488905 PNMA8CA0A1B0GUJ8 204 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 NBR2O15453 112 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 PDCD6O75340 191 aa14.32□□□□□ -0.12
HDAC6-231ENST00000488905 LY86O95711 162 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms