RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TMEM69Q5SWH9 247 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 HACD4Q5VWC8 232 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 ZNF554Q86TJ5 538 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 LDLRAD3Q86YD5 345 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 LAX1Q8IWV1 398 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 ZDHHC22Q8N966 263 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 ZNF439Q8NDP4 499 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 OR10A7Q8NGE5 316 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 OR52M1Q8NGK5 317 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 PARP12Q9H0J9 701 aaKnown RBP8.95□□□□□ -0.98
UBE4B-210ENST00000488228 AUNIPQ9H7T9 357 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 OR2S2Q9NQN1 319 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 DIABLOQ9NR28 239 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 OR1A1Q9P1Q5 309 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 TBL2Q9Y4P3 447 aaKnown RBP8.95□□□□□ -0.98
UBE4B-210ENST00000488228 IGKV1-6A0A0C4DH72 117 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 J3QR06 171 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 XRCC3O43542 346 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 APOA1P02647 267 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 FCER2P06734 321 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 SCTP09683 121 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 HTR1DP28221 377 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 ARL6IP1Q15041 203 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 SSX2Q16385 188 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 PNLIPRP3Q17RR3 467 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 TMEM30BQ3MIR4 351 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 FOXB2Q5VYV0 432 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 MZT2AQ6P582 158 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 Q6YL49 198 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 BEND2Q8NDZ0 799 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 ZNF596Q8TC21 504 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 GALMQ96C23 342 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 S100A16Q96FQ6 103 aaKnown RBP8.94□□□□□ -0.98
UBE4B-210ENST00000488228 SLIRPQ9GZT3 109 aaKnown RBP8.94□□□□□ -0.98
UBE4B-210ENST00000488228 C6orf62Q9GZU0 229 aaPredicted RBP8.94□□□□□ -0.98
UBE4B-210ENST00000488228 MMP28Q9H239 520 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 MIXL1Q9H2W2 232 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 PRDM13Q9H4Q3 707 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 RAB9BQ9NP90 201 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 SLC23A1Q9UHI7 598 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 JPT1Q9UK76 154 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 HILPDAQ9Y5L2 63 aa8.94□□□□□ -0.98
UBE4B-210ENST00000488228 DPPA5A6NC42 116 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 MEIS3P1A6NDR6 274 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 FAM25AB3EWG3 89 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 FAM25CB3EWG5 89 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 FAM25GB3EWG6 89 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 TRDCB7Z8K6 153 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 BUB1B-PAK6H3BSN5 160 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 RGS5O15539 181 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 FABP7O15540 132 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 DTYMKP23919 212 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 MNDAP41218 407 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 UBA52P62987 128 aaKnown RBP8.93□□□□□ -0.98
UBE4B-210ENST00000488228 DIAPH2-AS1Q14236 149 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 SLC9A3R2Q15599 337 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 LRRC75BQ2VPJ9 315 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 IGSF11Q5DX21 431 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 TPTE2P1Q5T6R2 138 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 MINOS1Q5TGZ0 78 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 SNX29P2Q8IUI4 249 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 OR10X1Q8NGY0 326 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 SSMEM1Q8WWF3 244 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 TOMM40LQ969M1 308 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 ABHD14AQ9BUJ0 271 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 EXTL2Q9UBQ6 330 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 MGAT4AQ9UM21 535 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 AMMECR1Q9Y4X0 333 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-210ENST00000488228 MINOS1-NBL1R4GNA1 71 aa8.93□□□□□ -0.98
UBE4B-210ENST00000488228 FBN1P35555 2871 aaKnown RBP8.93□□□□□ -0.98
UBE4B-210ENST00000488228 SMIM31A0A1B0GVY4 71 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 LEUTXA8MZ59 168 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 H3BUX3 64 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 ZNF701M0R085 212 aaPredicted RBP8.92□□□□□ -0.98
UBE4B-210ENST00000488228 CTDSP2O14595 271 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 BET1O15155 118 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 ST8SIA5O15466 376 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 HSPA12AO43301 675 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 GSTT2P0CG29 244 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 GSTT2BP0CG30 244 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 KIR2DS4P43632 304 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 IER3P46695 156 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 REG1BP48304 166 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 ZNF134P52741 427 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 PRRX1P54821 245 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 HTD2P86397 168 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 KIR2DS1Q14954 304 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 LY6EQ16553 131 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 KRTAP24-1Q3LI83 254 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 MORN2Q502X0 79 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 RNASE12Q5GAN4 147 aaKnown RBP8.92□□□□□ -0.98
UBE4B-210ENST00000488228 CT45A1Q5HYN5 189 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 STEAP3Q658P3 488 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 CNIH2Q6PI25 160 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 SLC25A48Q6ZT89 311 aaKnown RBP8.92□□□□□ -0.98
UBE4B-210ENST00000488228 GVQW1Q8N7I0 195 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 OR4A4PQ8NGN8 299 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 CT45A3Q8NHU0 189 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 MCFD2Q8NI22 146 aa8.92□□□□□ -0.98
UBE4B-210ENST00000488228 CMTM3Q96MX0 182 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms