RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 H3BUI4 141 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 H3BUX3 64 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 SPINT2O43291 252 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 ELK1P19419 428 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 HTR1DP28221 377 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 REG1BP48304 166 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 TMBIM6P55061 237 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 SCGB2A2Q13296 93 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 IGSF11Q5DX21 431 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 MEGF9Q9H1U4 602 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 MMP28Q9H239 520 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 MIXL1Q9H2W2 232 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 OR2S2Q9NQN1 319 aa13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 TBL2Q9Y4P3 447 aaKnown RBP13.83□□□□□ -0.2
SHROOM1-205ENST00000488072 RNF212BA8MTL3 300 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 CTDSP2O14595 271 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 MORN2Q502X0 79 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 UBE2NLQ5JXB2 153 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 TPTE2P1Q5T6R2 138 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 HACD4Q5VWC8 232 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 CCBE1Q6UXH8 406 aaPredicted RBP13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 CROCCP3Q8IVE0 287 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 GVQW1Q8N7I0 195 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 OR10A7Q8NGE5 316 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 DYNC2LI1Q8TCX1 351 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 RAB2BQ8WUD1 216 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 C19orf24Q9BVV8 132 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 ABCG5Q9H222 651 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 AUNIPQ9H7T9 357 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 DPM3Q9P2X0 92 aa13.82□□□□□ -0.2
SHROOM1-205ENST00000488072 CCDC160A6NGH7 325 aa13.81□□□□□ -0.2
SHROOM1-205ENST00000488072 ST8SIA5O15466 376 aa13.81□□□□□ -0.2
SHROOM1-205ENST00000488072 ZNF182P17025 639 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-205ENST00000488072 LRRC75BQ2VPJ9 315 aa13.81□□□□□ -0.2
SHROOM1-205ENST00000488072 OR52M1Q8NGK5 317 aa13.81□□□□□ -0.2
SHROOM1-205ENST00000488072 MALSU1Q96EH3 234 aa13.81□□□□□ -0.2
SHROOM1-205ENST00000488072 ST6GALNAC5Q9BVH7 336 aa13.81□□□□□ -0.2
SHROOM1-205ENST00000488072 RIMS4Q9H426 269 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-205ENST00000488072 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.81□□□□□ -0.2
SHROOM1-205ENST00000488072 A0A0A6YYJ9 748 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 FAM181BA6NEQ2 426 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 TRDCB7Z8K6 153 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 CHST1O43916 411 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 RNASE1P07998 156 aaKnown RBP13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 RANBP1P43487 201 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 OR3A3P47888 321 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 PRRX1P54821 245 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 SCAND1P57086 179 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 TAS2R20P59543 309 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 GNG2P59768 71 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 MINOS1Q5TGZ0 78 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 FOXB2Q5VYV0 432 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 TRAT1Q6PIZ9 186 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 TMEM219Q86XT9 240 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 ZNF596Q8TC21 504 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 SSMEM1Q8WWF3 244 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 GALMQ96C23 342 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 SLC23A1Q9UHI7 598 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 MINOS1-NBL1R4GNA1 71 aa13.8□□□□□ -0.2
SHROOM1-205ENST00000488072 IGHV3-72A0A0B4J1Y9 119 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 SERPINE3A8MV23 424 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 LEUTXA8MZ59 168 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 ZNF736B4DX44 427 aaPredicted RBP13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 TRIM77I1YAP6 450 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 FABP7O15540 132 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 XRCC3O43542 346 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 GPR137BO60478 399 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 GSTP1P09211 210 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 TALDO1P37837 337 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 RELBQ01201 579 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 RNASE12Q5GAN4 147 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 C16orf87Q6PH81 154 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 SLC25A48Q6ZT89 311 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 MOB1BQ7L9L4 216 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 ODF3L1Q8IXM7 274 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 OR10X1Q8NGY0 326 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 CREB3L1Q96BA8 519 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 KCTD12Q96CX2 325 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 S100A16Q96FQ6 103 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 DCUN1D5Q9BTE7 237 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 DIABLOQ9NR28 239 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 RNF150Q9ULK6 438 aa13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 MRPS7Q9Y2R9 242 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-205ENST00000488072 A0A1W2PPI3 338 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 DPPA5A6NC42 116 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 CLDN34H7C241 214 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 J3QRK9 145 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 BET1O15155 118 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 HLA-DQB1P01920 261 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 CEACAM6P40199 344 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 LINC00205P59089 165 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 MRPS15P82914 257 aaKnown RBP13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 HTD2P86397 168 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 LAX1Q8IWV1 398 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 LYG1Q8N1E2 194 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 LINC00311Q8N616 119 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 DRAM1Q8N682 238 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 ST6GALNAC6Q969X2 333 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 PHF21AQ96BD5 680 aa13.78□□□□□ -0.2
SHROOM1-205ENST00000488072 ABHD14BQ96IU4 210 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms