RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CREB3L1Q96BA8 519 aa9.29□□□□□ -0.92
NUP50-216ENST00000486184 NXF2Q9GZY0 626 aaKnown RBP9.29□□□□□ -0.92
NUP50-216ENST00000486184 GFOD1Q9NXC2 390 aa9.29□□□□□ -0.92
NUP50-216ENST00000486184 RABL2AQ9UBK7 228 aaPredicted RBP9.29□□□□□ -0.92
NUP50-216ENST00000486184 ZNF230Q9UIE0 474 aaPredicted RBP9.29□□□□□ -0.92
NUP50-216ENST00000486184 JPT1Q9UK76 154 aa9.29□□□□□ -0.92
NUP50-216ENST00000486184 RABL2BQ9UNT1 228 aa9.29□□□□□ -0.92
NUP50-216ENST00000486184 TBL2Q9Y4P3 447 aaKnown RBP9.29□□□□□ -0.92
NUP50-216ENST00000486184 AMMECR1Q9Y4X0 333 aaPredicted RBP9.29□□□□□ -0.92
NUP50-216ENST00000486184 A3GALT2U3KPV4 340 aa9.29□□□□□ -0.92
NUP50-216ENST00000486184 NAV3Q8IVL0 2385 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 A0A087X0M5 115 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 A0A1B0GX30 115 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 MEIS3P1A6NDR6 274 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 A6NHS1 94 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 FABP7O15540 132 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 IFNA2P01563 188 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 IGHV3-7P01780 117 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 FBP1P09467 338 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 PTHLHP12272 177 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 ZBTB25P24278 435 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 IL3RAP26951 378 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 HTR1DP28221 377 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 CD34P28906 385 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 CEACAM3P40198 252 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 ARPC4P59998 168 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 SRSF7Q16629 238 aaKnown RBP eCLIP9.28□□□□□ -0.92
NUP50-216ENST00000486184 Q3ZCU0 254 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 ZNF626Q68DY1 528 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 HCP5Q6MZN7 132 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 C9orf139Q6ZV77 190 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 OR52L2PQ8NGH6 319 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 OR10X1Q8NGY0 326 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 ZNF418Q8TF45 676 aaPredicted RBP9.28□□□□□ -0.92
NUP50-216ENST00000486184 LEAP2Q969E1 77 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 SLC6A7Q99884 636 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 GINS4Q9BRT9 223 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 MIXL1Q9H2W2 232 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 SCPEP1Q9HB40 452 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 SLC23A1Q9UHI7 598 aa9.28□□□□□ -0.92
NUP50-216ENST00000486184 A0A0U1RQK1 487 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 ODF3BA8MYP8 253 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 J3QR06 171 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 BET1O15155 118 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 SSX5O60225 188 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 TPPPO94811 219 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 LPLP06858 475 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 SCTP09683 121 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 PPP1CCP36873 323 aaKnown RBP9.27□□□□□ -0.93
NUP50-216ENST00000486184 ARHGDIBP52566 201 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 LOXL3P58215 753 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 HLA-DRB5Q30154 266 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 RNASE12Q5GAN4 147 aaKnown RBP9.27□□□□□ -0.93
NUP50-216ENST00000486184 FAM131AQ6UXB0 335 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 Q6ZPA2 131 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 Q6ZS49 121 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 BEND2Q8NDZ0 799 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 BEST4Q8NFU0 473 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 OR2AK2Q8NG84 335 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 OR10J5Q8NHC4 309 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 EDARADDQ8WWZ3 215 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 MMP28Q9H239 520 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 PSG11Q9UQ72 335 aa9.27□□□□□ -0.93
NUP50-216ENST00000486184 MTORP42345 2549 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 FN1P02751 2386 aaKnown RBP9.26□□□□□ -0.93
NUP50-216ENST00000486184 A0A1W2PPE3 182 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 FABP12A6NFH5 140 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 LEUTXA8MZ59 168 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 SULT1C2O00338 296 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 YPEL1O60688 119 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 DIRAS3O95661 229 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 HLA-DQB1P01920 261 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 CTXN2P0C2S0 81 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 GSTT2P0CG29 244 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 GSTT2BP0CG30 244 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 TNFSF8P32971 234 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 CEACAM6P40199 344 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 MRPS10P82664 201 aaKnown RBP9.26□□□□□ -0.93
NUP50-216ENST00000486184 GNMTQ14749 295 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 DEFB112Q30KQ8 113 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 MORN2Q502X0 79 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 SPANXN2Q5MJ10 180 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 MINOS1Q5TGZ0 78 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 PYHIN1Q6K0P9 492 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 C5orf24Q7Z6I8 188 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 HOGA1Q86XE5 327 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 BCL6BQ8N143 479 aaPredicted RBP9.26□□□□□ -0.93
NUP50-216ENST00000486184 C8orf31Q8N9H6 132 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 FCAMRQ8WWV6 532 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 GCDHQ92947 438 aaPredicted RBP9.26□□□□□ -0.93
NUP50-216ENST00000486184 YPEL2Q96QA6 119 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 JMJD8Q96S16 334 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 ABHD14AQ9BUJ0 271 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 DPM3Q9P2X0 92 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 ANXA10Q9UJ72 324 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 MINOS1-NBL1R4GNA1 71 aa9.26□□□□□ -0.93
NUP50-216ENST00000486184 BTBD17A6NE02 478 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 BUB1B-PAK6H3BSN5 160 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 TCF21O43680 179 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms