RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 LY6G5BQ8NDX9 201 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 OR5AP2Q8NGF4 316 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 OR5H2Q8NGV7 314 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 C8orf46Q8TAG6 207 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 CCL13Q99616 98 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 ZNF230Q9UIE0 474 aaPredicted RBP13.97□□□□□ -0.17
VIM-205ENST00000485947 ANXA10Q9UJ72 324 aa13.97□□□□□ -0.17
VIM-205ENST00000485947 DNAJC9-AS1A6NH13 148 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 DISC1C4P0D8 188 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 MT-ND4P03905 459 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 TFF1P04155 84 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 SLC6A1P30531 599 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 OR3A3P47888 321 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 ARPC4P59998 168 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 KRBOX4Q5JUW0 171 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 TRAT1Q6PIZ9 186 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 ZNF554Q86TJ5 538 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 C3orf56Q8N813 242 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 ZNRF1Q8ND25 227 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 ENKURQ8TC29 256 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 COQ2Q96H96 371 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 ZNF48Q96MX3 618 aaPredicted RBP13.96□□□□□ -0.17
VIM-205ENST00000485947 PCGF1Q9BSM1 259 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 SIRPDQ9H106 197 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 MBNL3Q9NUK0 354 aaKnown RBP13.96□□□□□ -0.17
VIM-205ENST00000485947 COPZ2Q9P299 210 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 TRAPPC2LQ9UL33 140 aa13.96□□□□□ -0.17
VIM-205ENST00000485947 FAM240BA0A1B0GVZ2 78 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 FCER2P06734 321 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 BTCP35070 178 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 HRH1P35367 487 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 RFX2P48378 723 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 CDK10Q15131 360 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 C6orf183Q5T699 404 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 Q6ZPA2 131 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 GDPD3Q7L5L3 318 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 CENPSQ8N2Z9 138 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 ARRDC1Q8N5I2 433 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 DUSP18Q8NEJ0 188 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 TMEM185AQ8NFB2 350 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 MAFIPQ8WZ33 124 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 TBX15Q96SF7 602 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 DPAGT1Q9H3H5 408 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 SLC2A8Q9NY64 477 aa13.95□□□□□ -0.18
VIM-205ENST00000485947 CENPVL3A0A0U1RRI6 287 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 TRDCB7Z8K6 153 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 M0QYG6 137 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 DIRAS3O95661 229 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 IFNA6P05013 189 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 CTXN2P0C2S0 81 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 P2RX3P56373 397 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 RPL15P61313 204 aaKnown RBP13.94□□□□□ -0.18
VIM-205ENST00000485947 HLA-DRB3P79483 266 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 AESQ08117 197 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 SLC9A3R2Q15599 337 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 ZNF782Q6ZMW2 699 aaPredicted RBP13.94□□□□□ -0.18
VIM-205ENST00000485947 NRARPQ7Z6K4 114 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 TMEM17Q86X19 198 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 FAM216BQ8N7L0 139 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 ZDHHC16Q969W1 377 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 PRRT1Q99946 306 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 DCTN5Q9BTE1 182 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 TINAGL1Q9GZM7 467 aaPredicted RBP13.94□□□□□ -0.18
VIM-205ENST00000485947 NECAP2Q9NVZ3 263 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 MCUBQ9NWR8 336 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 KIF25Q9UIL4 384 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 SCP2D1Q9UJQ7 156 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 POMT1Q9Y6A1 747 aa13.94□□□□□ -0.18
VIM-205ENST00000485947 IGKV1D-8A0A087WSZ0 117 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 MEIKINA0A087WXM9 373 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 IGHV1-69DA0A0B4J2H0 117 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 FABP7O15540 132 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 FCN3O75636 299 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 IGHV1-69P01742 117 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 PMP2P02689 132 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 AMY2AP04746 511 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 ZNF735P0CB33 412 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 HMGN3Q15651 99 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 AWAT1Q58HT5 328 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 Q6YL49 198 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 OVCH2Q7RTZ1 564 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 OR4D10Q8NGI6 311 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 OR4A4PQ8NGN8 299 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 OR56B4Q8NH76 319 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 SGMS2Q8NHU3 365 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 UNKLQ9H9P5 680 aaKnown RBP13.93□□□□□ -0.18
VIM-205ENST00000485947 EHFQ9NZC4 300 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 KCNIP1Q9NZI2 227 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 OR6C3Q9NZP0 311 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 SLC25A10Q9UBX3 287 aaPredicted RBP13.93□□□□□ -0.18
VIM-205ENST00000485947 DSCAML1Q8TD84 2053 aa13.93□□□□□ -0.18
VIM-205ENST00000485947 MEGF8Q7Z7M0 2845 aa13.92□□□□□ -0.18
VIM-205ENST00000485947 TRBV23-1A0A0A0MS06 115 aa13.92□□□□□ -0.18
VIM-205ENST00000485947 A0A1B0GUS0 222 aa13.92□□□□□ -0.18
VIM-205ENST00000485947 A0A1B0GW55 424 aa13.92□□□□□ -0.18
VIM-205ENST00000485947 ODAMA1E959 279 aa13.92□□□□□ -0.18
VIM-205ENST00000485947 M0R1W7 72 aa13.92□□□□□ -0.18
VIM-205ENST00000485947 DUX4L2P0CJ85 424 aa13.92□□□□□ -0.18
VIM-205ENST00000485947 DUX4L3P0CJ86 424 aa13.92□□□□□ -0.18
VIM-205ENST00000485947 DUX4L4P0CJ87 422 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms