RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 ZNF561Q8N587 486 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 CCNYL1Q8N7R7 359 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 DCAKDQ8WVC6 231 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 TUBGCP3Q96CW5 907 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 L3HYPDHQ96EM0 354 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 CCL13Q99616 98 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 ECSITQ9BQ95 431 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 MRPL57Q9BQC6 102 aaKnown RBP2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 SLC19A3Q9BZV2 496 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 VCXQ9H320 206 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 RIBC2Q9H4K1 309 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 RMND5AQ9H871 391 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 C1orf109Q9NX04 203 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 FBXL3Q9UKT7 428 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 ZNF443Q9Y2A4 671 aaPredicted RBP2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 DNAH17Q9UFH2 4485 aa2.63□□□□□ -1.99
SMARCC1-207ENST00000485833 DSCAML1Q8TD84 2053 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 TRAV36DV7A0A075B6V5 113 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 RNF222A6NCQ9 220 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 ZNF726A6NNF4 738 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 SEC14L6B5MCN3 397 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 TPST2O60704 377 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 FSTL3O95633 263 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 AK1P00568 194 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 KRT16P08779 473 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 SPNP16150 400 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 RCC1P18754 421 aaPredicted RBP2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 FUT1P19526 365 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 IMPDH1P20839 514 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 CNTFRP26992 372 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 LAP3P28838 519 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 SOX6P35712 828 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 HPCAL1P37235 193 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 CDKN2CP42773 168 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 RGS6P49758 472 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 GBX2P52951 348 aaPredicted RBP2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 PKNOX1P55347 436 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 DR1Q01658 176 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 PAX5Q02548 391 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 OR8B8Q15620 311 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 HIST3H3Q16695 136 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 DGUOKQ16854 277 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 CYS1Q717R9 158 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 NUDCD3Q8IVD9 361 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 TPRX1Q8N7U7 411 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 Q8N9W7 124 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 NOXO1Q8NFA2 376 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 OR8G5Q8NG78 346 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 OR52I1Q8NGK6 324 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 OR4A15Q8NGL6 344 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 OR52P1PQ8NH57 321 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 OR6X1Q8NH79 312 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 MCHR1Q99705 422 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 ERP44Q9BS26 406 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 RNF126Q9BV68 326 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 MRPL13Q9BYD1 178 aaKnown RBP2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 GPR61Q9BZJ8 451 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 RAB17Q9H0T7 212 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 C1orf198Q9H425 327 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 TAS2R5Q9NYW4 299 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 LINC00527Q9UJ94 153 aa2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 PRPF19Q9UMS4 504 aaKnown RBP2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 CAB39Q9Y376 341 aaPredicted RBP2.62□□□□□ -1.99
SMARCC1-207ENST00000485833 DNAH6Q9C0G6 4158 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 EXOC1LA0A1B0GW35 172 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 LRCOL1A6NCL2 159 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 LRRC30A6NM36 301 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 VGLL3A8MV65 326 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 H3BSA7 217 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 RAD51CO43502 376 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 TPST1O60507 370 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 FARS2O95363 451 aaKnown RBP2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 CPSF4O95639 269 aaKnown RBP2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 CLIC3O95833 236 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 GUSBP08236 651 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 CCL3L1P16619 93 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 GSTM3P21266 225 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 MYCNOSP40205 109 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 SRP9P49458 86 aaKnown RBP2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 HERVK_113P61574 105 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 BDH1Q02338 343 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 UNC119Q13432 240 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 EIF4EBP1Q13541 118 aaPredicted RBP2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 SGCAQ16586 387 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 MAJINQ3KP22 176 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 ABCA11PQ4W5N1 156 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 ZNF429Q86V71 674 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 SLC30A8Q8IWU4 369 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 RNF148Q8N7C7 305 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 OR4X2Q8NGF9 303 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 OR56B1Q8NGI3 324 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 OR52H1Q8NGJ2 320 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 OR52M1Q8NGK5 317 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 AGR3Q8TD06 166 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 ACTRT1Q8TDG2 376 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 H1FXQ92522 213 aaKnown RBP2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 SLC38A4Q969I6 547 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 DUS3LQ96G46 650 aaKnown RBP2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 SDSLQ96GA7 329 aa2.61□□□□□ -1.99
SMARCC1-207ENST00000485833 SLC25A44Q96H78 314 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms