RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SIRT7Q9NRC8 400 aa14.38□□□□□ -0.11
CHMP3-207ENST00000485465 NECAP2Q9NVZ3 263 aa14.38□□□□□ -0.11
CHMP3-207ENST00000485465 OR1A1Q9P1Q5 309 aa14.38□□□□□ -0.11
CHMP3-207ENST00000485465 GNG12Q9UBI6 72 aa14.38□□□□□ -0.11
CHMP3-207ENST00000485465 SLC23A1Q9UHI7 598 aa14.38□□□□□ -0.11
CHMP3-207ENST00000485465 JPT1Q9UK76 154 aa14.38□□□□□ -0.11
CHMP3-207ENST00000485465 TRBV6-7A0A0A0MS04 114 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 CD3DP04234 171 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 TBPP20226 339 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 ZBTB25P24278 435 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 HRH1P35367 487 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 OR3A3P47888 321 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 PRB3Q04118 309 aaPredicted RBP14.37□□□□□ -0.11
CHMP3-207ENST00000485465 GNMTQ14749 295 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 ACTBL2Q562R1 376 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 KIAA2026Q5HYC2 2103 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 UTF1Q5T230 341 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 OR10V1Q8NGI7 309 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 OR10J5Q8NHC4 309 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 TNFRSF14Q92956 283 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 HEXA-AS1Q9H8Q6 139 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 KCNS2Q9ULS6 477 aa14.37□□□□□ -0.11
CHMP3-207ENST00000485465 A0A087X0M5 115 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 A0A1B0GX30 115 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 FAM172BPA6NC97 362 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 HSPA12AO43301 675 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 YPEL1O60688 119 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 AVPP01185 164 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 CD74P04233 296 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 OR5H8P0DN80 308 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 HOXB4P17483 251 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-207ENST00000485465 PPP1CCP36873 323 aaKnown RBP14.36□□□□□ -0.11
CHMP3-207ENST00000485465 CEACAM6P40199 344 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 RFX2P48378 723 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 AP3S2P59780 193 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 KLF9Q13886 244 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-207ENST00000485465 MORN2Q502X0 79 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 NCR3LG1Q68D85 454 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 STEAP1BQ6NZ63 245 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 OVCH2Q7RTZ1 564 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 TOMM5Q8N4H5 51 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 OR13D1Q8NGV5 346 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 LEAP2Q969E1 77 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 UPRTQ96BW1 309 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 YPEL2Q96QA6 119 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 GINS4Q9BRT9 223 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 EHFQ9NZC4 300 aa14.36□□□□□ -0.11
CHMP3-207ENST00000485465 FLNAP21333 2647 aaKnown RBP14.36□□□□□ -0.11
CHMP3-207ENST00000485465 CREBBPQ92793 2442 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 M0QYG6 137 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 RGS11O94810 467 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 RAB3DO95716 219 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 AKAIN1P0CW23 69 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 COX7A1P24310 79 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 CD34P28906 385 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 INPP1P49441 399 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 KLRD1Q13241 179 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 DYRK1AQ13627 763 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 RNASE10Q5GAN6 216 aaKnown RBP14.35□□□□□ -0.11
CHMP3-207ENST00000485465 LY6G6FQ5SQ64 297 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 VAX1Q5SQQ9 334 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 ZNF57Q68EA5 555 aaPredicted RBP14.35□□□□□ -0.11
CHMP3-207ENST00000485465 HCP5Q6MZN7 132 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 H1FOOQ8IZA3 346 aaPredicted RBP14.35□□□□□ -0.11
CHMP3-207ENST00000485465 ABHD12Q8N2K0 398 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 LHX4Q969G2 390 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 SMR3AQ99954 134 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 TINAGL1Q9GZM7 467 aaPredicted RBP14.35□□□□□ -0.11
CHMP3-207ENST00000485465 TOLLIPQ9H0E2 274 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 ZNF69Q9UC07 566 aa14.35□□□□□ -0.11
CHMP3-207ENST00000485465 IGHV2-26A0A0B4J1V2 119 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 RNASEK-C17orf49H0YIS7 233 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 UPK1BO75841 260 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 IGHV3-7P01780 117 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 Q3ZCU0 254 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 C1orf229Q6ZS94 237 aaPredicted RBP14.34□□□□□ -0.11
CHMP3-207ENST00000485465 PNKDQ8N490 385 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 OR4D10Q8NGI6 311 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 CLEC7AQ9BXN2 247 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 YAE1D1Q9NRH1 226 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 ABCB10Q9NRK6 738 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 RDH8Q9NYR8 311 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 PSG11Q9UQ72 335 aa14.34□□□□□ -0.11
CHMP3-207ENST00000485465 LY6G6DO95868 133 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 IFNA6P05013 189 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 NFYAP23511 347 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-207ENST00000485465 FCGR2CP31995 323 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 GNG10P50151 68 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 MEF2DQ14814 521 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 DHRS11Q6UWP2 260 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 PDZD9Q8IXQ8 264 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 C8orf31Q8N9H6 132 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 ZNF439Q8NDP4 499 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 OR11H6Q8NGC7 330 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 OR4C16Q8NGL9 310 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 OR9G1Q8NH87 305 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 GIMAP1Q8WWP7 306 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 DEDD2Q8WXF8 326 aa14.33□□□□□ -0.12
CHMP3-207ENST00000485465 PARP12Q9H0J9 701 aaKnown RBP14.33□□□□□ -0.12
CHMP3-207ENST00000485465 HRASLSQ9HDD0 168 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms