RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 NMNAT2Q9BZQ4 307 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 PBOV1Q9GZY1 135 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 MFFQ9GZY8 342 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 MED20Q9H944 212 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 EXOSC4Q9NPD3 245 aaKnown RBP3.93□□□□□ -1.78
PTPN4-210ENST00000485247 KRT84Q9NSB2 600 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 ZNF355PQ9NSJ1 428 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 FAM206AQ9NX38 181 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 CNOT2Q9NZN8 540 aaKnown RBP3.93□□□□□ -1.78
PTPN4-210ENST00000485247 TP53TG1Q9Y2A0 90 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 FAM32AQ9Y421 112 aaKnown RBP3.93□□□□□ -1.78
PTPN4-210ENST00000485247 SELENOKQ9Y6D0 94 aa3.93□□□□□ -1.78
PTPN4-210ENST00000485247 DNAH17Q9UFH2 4485 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 MEIKINA0A087WXM9 373 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 TRBV2A0A0J9YWF9 115 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 C13orf42A0A1B0GVH6 325 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 FAM220BPB1ANY3 271 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 FXYD1O00168 92 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 HSPB6O14558 160 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 SELENOFO60613 162 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 IGLV3-1P01715 115 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 RBMY1CP0DJD4 496 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 CD40LGP29965 261 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 C21orf33P30042 268 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-210ENST00000485247 SSTR5P35346 364 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 NUDT2P50583 147 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 TIRAPP58753 221 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 ACTBP60709 375 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 SUMO2P61956 95 aaKnown RBP3.92□□□□□ -1.78
PTPN4-210ENST00000485247 TATDN3Q17R31 274 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 DEFB114Q30KQ6 69 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 PYHIN1Q6K0P9 492 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 MZT2AQ6P582 158 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 FAHD1Q6P587 224 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 UNQ5815/PRO19632Q6UWF5 114 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 SLC16A13Q7RTY0 426 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 TMEM179BQ7Z7N9 219 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 Q8IYB0 196 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 TCTEX1D1Q8N7M0 179 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 DNAAF1Q8NEP3 725 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 OTOSQ8NHW6 89 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 MRGPRDQ8TDS7 321 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 DYNLRB2Q8TF09 96 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPN4-210ENST00000485247 C18orf15Q96N68 181 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 ZNF251Q9BRH9 671 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 FUZQ9BT04 418 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 FAM103A1Q9BTL3 118 aaKnown RBP3.92□□□□□ -1.78
PTPN4-210ENST00000485247 SLA2Q9H6Q3 261 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 NDUFAF4Q9P032 175 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 PEMTQ9UBM1 199 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 GTF2A1LQ9UNN4 478 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 KLHDC2Q9Y2U9 406 aa3.92□□□□□ -1.78
PTPN4-210ENST00000485247 IGLV2-18A0A075B6J9 118 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 TRAV39A0A0B4J263 110 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 ACOD1A6NK06 481 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 NPIPB11E5RHQ5 1161 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 SLC33A1O00400 549 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-210ENST00000485247 NBR2O15453 112 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 MAGEB3O15480 346 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 OR2A4O95047 310 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 CYB5AP00167 134 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 TRBV12-3P01733 135 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 TTRP02766 147 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 CSN2P05814 226 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 EDN2P20800 178 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 IL3RAP26951 378 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 VHLP40337 213 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 KIR2DS2P43631 304 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 GSSP48637 474 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 ALDH3A2P51648 485 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 CRIP2P52943 208 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-210ENST00000485247 HCCSP53701 268 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 MFAP2P55001 183 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 APOC4P55056 127 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 CX3CL1P78423 397 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 TMEM267Q0VDI3 215 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-210ENST00000485247 TSPAN31Q12999 210 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 UBE2V2Q15819 145 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 C5orf64Q2M2E5 130 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 RPEL1Q2QD12 228 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 LGALS9BQ3B8N2 356 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 SOHLH1Q5JUK2 328 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 ZNF660Q6AZW8 331 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-210ENST00000485247 AWAT2Q6E213 333 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 SLC16A12Q6ZSM3 486 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 POM121L12Q8N7R1 296 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 OR52B4Q8NGK2 314 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 OR8D4Q8NGM9 314 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 UBALD1Q8TB05 177 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 GNPDA2Q8TDQ7 276 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 BORCS8Q96FH0 119 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 RDH12Q96NR8 316 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 FYTTD1Q96QD9 318 aaKnown RBP3.91□□□□□ -1.78
PTPN4-210ENST00000485247 CST11Q9H112 138 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 OR51V1Q9H2C8 321 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 LINC00574Q9H8X3 128 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 HMG20AQ9NP66 347 aa3.91□□□□□ -1.78
PTPN4-210ENST00000485247 PEF1Q9UBV8 284 aaKnown RBP3.91□□□□□ -1.78
PTPN4-210ENST00000485247 KIF25Q9UIL4 384 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms