RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 TNRC6AQ8NDV7 1962 aaKnown RBP3.65□□□□□ -1.83
GPNMB-210ENST00000478451 KMT2EQ8IZD2 1858 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 MYO9BQ13459 2157 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 A0A087WWC5 75 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 NSG1A0A0A6YYJ2 146 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 IGKV1-9A0A0C4DH69 117 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 KIR2DS1A0A191URI9 304 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 OR6C6A6NF89 314 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 EPOPA6NHQ4 379 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 COLCA2A8K830 154 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 C17orf51A8MQB3 221 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 B4DEV8 164 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 C9J4A7 227 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 F5H5K5 113 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 WRBO00258 174 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 VCYO14598 125 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 RER1O15258 196 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 PDCD6O75340 191 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 PITX3O75364 302 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 CBR3O75828 277 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 OR2J2O76002 312 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 F10P00742 488 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 SNRNP70P08621 437 aaKnown RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 CTXN2P0C2S0 81 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 OR8U9P0C7N5 309 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 SLC2A1P11166 492 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF44P15621 663 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 RCC1P18754 421 aaPredicted RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 TCN2P20062 427 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 EIF2S3P41091 472 aaKnown RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 KIR2DS4P43632 304 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 SSR4P51571 173 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 EFNA3P52797 238 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 CLDN15P56746 228 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 CD81P60033 236 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 RND3P61587 244 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 RPL36AP83881 106 aaKnown RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 TLE4Q04727 773 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 BAXQ07812 192 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM187Q14656 261 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 KIR2DS1Q14954 304 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 OR8G1Q15617 311 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 UBE2V2Q15819 145 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 TMEM176BQ3YBM2 270 aaPredicted RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 SOHLH1Q5JUK2 328 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 FAM27BQ5VT28 67 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 PRSS57Q6UWY2 283 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 ASCL4Q6XD76 172 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 Q6ZS49 121 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 DPPA2Q7Z7J5 298 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 LINC00596Q86U02 117 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 SAXO1Q8IYX7 474 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 GPR137CQ8N3F9 429 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 LRRC18Q8N456 261 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF565Q8N9K5 539 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 SUMF2Q8NBJ7 301 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 OR5D18Q8NGL1 313 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 LILRB1Q8NHL6 650 aaPredicted RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 M1APQ8TC57 530 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 NPRL2Q8WTW4 380 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 RTN4IP1Q8WWV3 396 aaPredicted RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 RLN3Q8WXF3 142 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 NAT6Q93015 286 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 IL22RA2Q969J5 263 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 TOMM40LQ969M1 308 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 PIGTQ969N2 578 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 HIST1H2BAQ96A08 127 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 MRPL24Q96A35 216 aaKnown RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 MOB3AQ96BX8 217 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 RBMXL1Q96E39 390 aaKnown RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 REEP6Q96HR9 211 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 AKR1E2Q96JD6 320 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 SPACA5Q96QH8 159 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 OR6C1Q96RD1 312 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 RASL10BQ96S79 203 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 RBM24Q9BX46 236 aaKnown RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 ESRP2Q9H6T0 727 aaKnown RBP3.64□□□□□ -1.83
GPNMB-210ENST00000478451 SPACA1Q9HBV2 294 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 SIRT7Q9NRC8 400 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 OR6C3Q9NZP0 311 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 RNF150Q9ULK6 438 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 AMDHD2Q9Y303 409 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 PAM16Q9Y3D7 125 aa3.64□□□□□ -1.83
GPNMB-210ENST00000478451 C5orf42Q9H799 3197 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 LOC102723996A0A087X1L8 192 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 IGHV3-20A0A0C4DH32 117 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 ZNF816-ZNF321PA0A0X1KG74 233 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 C3orf85A0A1B0GTC6 90 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 A0A1W2PP11 408 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 MEX3AA1L020 520 aaKnown RBP3.63□□□□□ -1.83
GPNMB-210ENST00000478451 C7orf77A4D0Y5 90 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 OR5H15A6NDH6 313 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 C5orf52A6NGY3 159 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 CYSRT1A8MQ03 144 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 AGPAT2O15120 278 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 SIGLEC5O15389 551 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 PHF1O43189 567 aaPredicted RBP3.63□□□□□ -1.83
GPNMB-210ENST00000478451 EFNA2O43921 213 aa3.63□□□□□ -1.83
GPNMB-210ENST00000478451 EIF3GO75821 320 aaKnown RBP eCLIP3.63□□□□□ -1.83
GPNMB-210ENST00000478451 DFFBO76075 338 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms