RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 GFRA3O60609 400 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 CTSSP25774 331 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 HSD17B13Q7Z5P4 300 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-208ENST00000478423 CCL13Q99616 98 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
NPHP4-208ENST00000478423 TNFSF18Q9UNG2 199 aa12.26□□□□□ -0.45
NPHP4-208ENST00000478423 C9orf172C9J069 976 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 A0A1B0GU03 582 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 NPIPB7O75200 414 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 TOX4O94842 621 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 CNN1P51911 297 aaKnown RBP12.25□□□□□ -0.45
NPHP4-208ENST00000478423 TNXAQ16473 311 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 FADS6Q8N9I5 356 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 OR8G5Q8NG78 346 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 OR8B3Q8NGG8 313 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 Q96M66 194 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 OR8B2Q96RD0 313 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 DLL3Q9NYJ7 618 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 A0A0G2JK05 382 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 KLF7O75840 302 aaPredicted RBP12.25□□□□□ -0.45
NPHP4-208ENST00000478423 LYPD3O95274 346 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 HBZP02008 142 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 ZNF250P15622 560 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 RPS11P62280 158 aaKnown RBP eCLIP12.25□□□□□ -0.45
NPHP4-208ENST00000478423 HARBI1Q96MB7 349 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 LPAR3Q9UBY5 353 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 HSF4Q9ULV5 492 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 AMMECR1Q9Y4X0 333 aaPredicted RBP12.25□□□□□ -0.45
NPHP4-208ENST00000478423 FER1L5A0AVI2 2057 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 SHANK1Q9Y566 2161 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 ZNF320A2RRD8 509 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 MPV17P39210 176 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 FABP9Q0Z7S8 132 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 ATP5SQ99766 215 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 PIPOXQ9P0Z9 390 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 DOK5Q9P104 306 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 INSIG2Q9Y5U4 225 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 POMT1Q9Y6A1 747 aa12.25□□□□□ -0.45
NPHP4-208ENST00000478423 CD200P41217 278 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 SULT1A1P50225 295 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 RHOBP62745 196 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FNDC7Q5VTL7 733 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 ABHD14BQ96IU4 210 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 GPHA2Q96T91 129 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 PCNX2A6NKB5 2137 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 HEATR1Q9H583 2144 aaKnown RBP12.24□□□□□ -0.45
NPHP4-208ENST00000478423 CLRN3Q8NCR9 226 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 OR52L2PQ8NGH6 319 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 PKIBQ9C010 78 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 SLC25A10Q9UBX3 287 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-208ENST00000478423 TIMM9Q9Y5J7 89 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A10PA6NDY2 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A18PA6NE21 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A16PA6NEW6 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A20PA6NIJ5 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A8PA6NJQ4 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A7PA6NKC0 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A22PA8MWA6 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A12PA8MX19 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A5PA8MXJ8 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A23PA8MXZ1 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 ZNF737O75373 536 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A15PP0C7V4 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A13PP0C7W8 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A14PP0C7W9 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 FAM90A24PP0C7X0 464 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 HLA-GP17693 338 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 CXCL2P19875 107 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 CEBPDP49716 269 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-208ENST00000478423 TNFSF10P50591 281 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 ERVFC1-1P60608 527 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 Q6ZT83 130 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 C1QL2Q7Z5L3 287 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 BARX1Q9HBU1 254 aaPredicted RBP12.24□□□□□ -0.45
NPHP4-208ENST00000478423 MPDZO75970 2070 aa12.24□□□□□ -0.45
NPHP4-208ENST00000478423 LOC390937A0A1W2PQ73 354 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 G3V3Q6 166 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 P2RY4P51582 365 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 Q56UQ5 140 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 ETFRF1Q6IPR1 90 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 ZNF561Q8N587 486 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 NDFIP1Q9BT67 221 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 LINC00470Q9BZP3 86 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 UBTD1Q9HAC8 227 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 NIT2Q9NQR4 276 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 SLC45A2Q9UMX9 530 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 TP53BP1Q12888 1972 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-208ENST00000478423 ATRXP46100 2492 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 PRR19A6NJB7 356 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 FBP1P09467 338 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 REG1BP48304 166 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 SSX8Q7RTT4 187 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 FLYWCH2Q96CP2 140 aaKnown RBP12.23□□□□□ -0.45
NPHP4-208ENST00000478423 NPAS1Q99742 590 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 LIPGQ9Y5X9 500 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 NOTCH4Q99466 2003 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 C20orf202A1L168 122 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 KLK2P20151 261 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 SLC25A53Q5H9E4 307 aa12.23□□□□□ -0.45
NPHP4-208ENST00000478423 PLAC9Q5JTB6 97 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms