RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 LRFN3Q9BTN0 628 aa9.65□□□□□ -0.86
NUP188-205ENST00000477069 HRH4Q9H3N8 390 aa9.65□□□□□ -0.86
NUP188-205ENST00000477069 METRNQ9UJH8 293 aa9.65□□□□□ -0.86
NUP188-205ENST00000477069 ATG12O94817 140 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 DANCRP0C864 163 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 CEACAM6P40199 344 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 BLOC1S1P78537 153 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 LRP11Q86VZ4 500 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 DRAM1Q8N682 238 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 TMEM252Q8N6L7 170 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 OR1L1Q8NH94 360 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 SNIP1Q8TAD8 396 aaKnown RBP9.65□□□□□ -0.87
NUP188-205ENST00000477069 LSM10Q969L4 123 aaKnown RBP9.65□□□□□ -0.87
NUP188-205ENST00000477069 C5orf30Q96GV9 206 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 SFXN3Q9BWM7 321 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 MAGT1Q9H0U3 335 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 PLEKHF2Q9H8W4 249 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 LUZP4Q9P127 313 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 CARHSP1Q9Y2V2 147 aaKnown RBP9.65□□□□□ -0.87
NUP188-205ENST00000477069 SPEF1Q9Y4P9 236 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 PRR14LQ5THK1 2151 aa9.65□□□□□ -0.87
NUP188-205ENST00000477069 PIGBOS1A0A0B4J2F0 54 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 A0A1B0GU03 582 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 OOEPA6NGQ2 149 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 A6NLC8 198 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 IGHV3-13P01766 116 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 ZNF83P51522 516 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 F2RL1P55085 397 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 AESQ08117 197 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 KRTCAP3Q53RY4 240 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 Q6ZRG5 221 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 Q6ZRM9 215 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 CD177Q8N6Q3 437 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.64□□□□□ -0.87
NUP188-205ENST00000477069 SH3BGRL3Q9H299 93 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 UFSP2Q9NUQ7 469 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 PPP1R3CQ9UQK1 317 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 FAM157AC9JC47 383 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 DNASE2O00115 360 aaPredicted RBP9.64□□□□□ -0.87
NUP188-205ENST00000477069 IGKV1-5P01602 117 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 MUC1P15941 1255 aaPredicted RBP9.64□□□□□ -0.87
NUP188-205ENST00000477069 EGR1P18146 543 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 PVALBP20472 110 aaPredicted RBP9.64□□□□□ -0.87
NUP188-205ENST00000477069 ID4P47928 161 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 COL10A1Q03692 680 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 ZNF273Q14593 569 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 SMIM21Q3B7S5 101 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 ASCL5Q7RTU5 278 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 TMEM171Q8WVE6 324 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 NARS2Q96I59 477 aaKnown RBP9.64□□□□□ -0.87
NUP188-205ENST00000477069 TSNAXQ99598 290 aaKnown RBP9.64□□□□□ -0.87
NUP188-205ENST00000477069 FAM212BQ9NTI7 297 aaPredicted RBP9.64□□□□□ -0.87
NUP188-205ENST00000477069 UQCC1Q9NVA1 299 aa9.64□□□□□ -0.87
NUP188-205ENST00000477069 MGAQ8IWI9 3026 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 HSPA12AO43301 675 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 CD5P06127 495 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 SERPINE2P07093 398 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 TDGF1P3P51864 188 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 SEBOXQ9HB31 216 aaPredicted RBP9.63□□□□□ -0.87
NUP188-205ENST00000477069 LIN7CQ9NUP9 197 aaKnown RBP9.63□□□□□ -0.87
NUP188-205ENST00000477069 CNOT1A5YKK6 2376 aaKnown RBP9.63□□□□□ -0.87
NUP188-205ENST00000477069 SRRM5B3KS81 715 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 M0R1B8 84 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 ZNF737O75373 536 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 HBZP02008 142 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 OR8U9P0C7N5 309 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 CFHR2P36980 270 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 ASCL1P50553 236 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 ARHGDIBP52566 201 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 CTAG1AP78358 180 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 BAXQ07812 192 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 MZT1Q08AG7 82 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 FAM53AQ6NSI3 398 aaPredicted RBP9.63□□□□□ -0.87
NUP188-205ENST00000477069 ZNF645Q8N7E2 425 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 OR2Z1Q8NG97 314 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 OR10Z1Q8NGY1 313 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 OR8U1Q8NH10 309 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 LRRC29Q8WV35 223 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 GALMQ96C23 342 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 SCRT1Q9BWW7 348 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 SLC25A31Q9H0C2 315 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 KCNIP1Q9NZI2 227 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 CACFD1Q9UGQ2 172 aa9.63□□□□□ -0.87
NUP188-205ENST00000477069 IGLV3-9A0A075B6K5 115 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 CHST1O43916 411 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 GLRXP35754 106 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 DEFA5Q01523 94 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 MSMO1Q15800 293 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 SPRNQ5BIV9 151 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 SPAG16Q8N0X2 631 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 OR52L2PQ8NGH6 319 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 LURAP1Q96LR2 239 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 NKX6-2Q9C056 277 aaPredicted RBP9.62□□□□□ -0.87
NUP188-205ENST00000477069 TMEM231Q9H6L2 316 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 KCNS2Q9ULS6 477 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 FAM96BQ9Y3D0 163 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 ARID1AO14497 2285 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 NXPH3O95157 252 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 GLIPR1P48060 266 aa9.62□□□□□ -0.87
NUP188-205ENST00000477069 GUCA2BQ16661 112 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms