RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 FAM90A1Q86YD7 464 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 OR8U1Q8NH10 309 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 IL22RA2Q969J5 263 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 MFSD2BA6NFX1 497 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 SERPINE2P07093 398 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 VDAC1P21796 283 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 GLIPR1P48060 266 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 GCSAMQ8N6F7 178 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 NUP37Q8NFH4 326 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 MRGPRDQ8TDS7 321 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 RND1Q92730 232 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 REG4Q9BYZ8 158 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 PARP12Q9H0J9 701 aaKnown RBP12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 POMT1Q9Y6A1 747 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 PTPRQQ9UMZ3 2332 aa12.89□□□□□ -0.35
RPUSD3-215ENST00000475470 KIAA2026Q5HYC2 2103 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 ADAM20O43506 726 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 IGLV2-14P01704 120 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 HBZP02008 142 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 EIF5AP63241 154 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 GNMTQ14749 295 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 TPRX1Q8N7U7 411 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 LINC00052Q96N35 136 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 IGKV1D-17A0A075B6S4 117 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 PIGBOS1A0A0B4J2F0 54 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 EDDM3AQ14507 147 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 NINJ1Q92982 152 aa12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 RCL1Q9Y2P8 373 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-215ENST00000475470 IGHV3OR15-7A0A075B7D8 119 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 ABCD4O14678 606 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 NKX2-1P43699 371 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 TMEM33P57088 247 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 TNFAIP6P98066 277 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 NMSQ5H8A3 153 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 RPL7L1Q6DKI1 246 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 OR52L2PQ8NGH6 319 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 TMED6Q8WW62 240 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 LURAP1Q96LR2 239 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 FBXL17Q9UF56 701 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 TNFSF4P23510 183 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 P2RY1P47900 373 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 SSX8Q7RTT4 187 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 PPP1R35Q8TAP8 253 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 IL19Q9UHD0 177 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 ZDHHC8Q9ULC8 765 aa12.87□□□□□ -0.35
RPUSD3-215ENST00000475470 DPRXA6NFQ7 191 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 LGALS8O00214 317 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 GPR137BO60478 399 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 ZNF737O75373 536 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 IGHV1-46P01743 117 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 THBDP07204 575 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 ZNF16P17020 682 aaPredicted RBP12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 GATA4P43694 442 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 PXDC1Q5TGL8 231 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 GPR157Q5UAW9 335 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 OR13A1Q8NGR1 328 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 ARL11Q969Q4 196 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 VKORC1Q9BQB6 163 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 SMIM3Q9BZL3 60 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 PLEKHF2Q9H8W4 249 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 TRGV8A0A0C4DH27 118 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 CLEC18AA5D8T8 446 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 LHBP01229 141 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 WNT2P09544 360 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 BSPH1Q075Z2 132 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 DRAM1Q8N682 238 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 CLEC18CQ8NCF0 446 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 DMBX1Q8NFW5 382 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 SNX22Q96L94 193 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 SEBOXQ9HB31 216 aaPredicted RBP12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 LIN7CQ9NUP9 197 aaKnown RBP12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 RNF150Q9ULK6 438 aa12.86□□□□□ -0.35
RPUSD3-215ENST00000475470 JTBO76095 146 aa12.85□□□□□ -0.35
RPUSD3-215ENST00000475470 PVALBP20472 110 aaPredicted RBP12.85□□□□□ -0.35
RPUSD3-215ENST00000475470 SSTR5P35346 364 aa12.85□□□□□ -0.35
RPUSD3-215ENST00000475470 PAX5Q02548 391 aa12.85□□□□□ -0.35
RPUSD3-215ENST00000475470 EIF5AL1Q6IS14 154 aaKnown RBP12.85□□□□□ -0.35
RPUSD3-215ENST00000475470 TRAT1Q6PIZ9 186 aa12.85□□□□□ -0.35
RPUSD3-215ENST00000475470 CLEC9AQ6UXN8 241 aa12.85□□□□□ -0.35
RPUSD3-215ENST00000475470 RNASE11Q8TAA1 199 aaKnown RBP12.85□□□□□ -0.35
RPUSD3-215ENST00000475470 RNF141Q8WVD5 230 aa12.85□□□□□ -0.35
RPUSD3-215ENST00000475470 GCM1Q9NP62 436 aa12.85□□□□□ -0.35
RPUSD3-215ENST00000475470 MEX3AA1L020 520 aaKnown RBP12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 MGST3O14880 152 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 SPINT2O43291 252 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 CASP6P55212 293 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 POLR2GP62487 172 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 CXorf66Q5JRM2 361 aaPredicted RBP12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 HSD17B13Q7Z5P4 300 aaPredicted RBP12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 ZNF645Q8N7E2 425 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 RFESDQ8TAC1 157 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 ERGIC1Q969X5 290 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 ABHD14BQ96IU4 210 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 OR2D2Q9H210 308 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 BARX1Q9HBU1 254 aaPredicted RBP12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 RNF7Q9UBF6 113 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 RNF212BA8MTL3 300 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 EPHA1P21709 976 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 FAM53AQ6NSI3 398 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms