RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 MDH2P40926 338 aaKnown RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 GPR6P46095 362 aaPredicted RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 OR3A1P47881 315 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 ATXN7L3Q14CW9 347 aaPredicted RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 CDNFQ49AH0 187 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 Q6ZTK2 550 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 C5orf24Q7Z6I8 188 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 LINC00596Q86U02 117 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 AKAP14Q86UN6 197 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 Q8N1X5 172 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 TOMM5Q8N4H5 51 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 TPRX1Q8N7U7 411 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 ASCC1Q8N9N2 400 aaKnown RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 CHST4Q8NCG5 386 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 PLPPR1Q8TBJ4 325 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 SMIM4Q8WVI0 70 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 CAPSLQ8WWF8 208 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 ST8SIA4Q92187 359 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 RAB3CQ96E17 227 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 COQ2Q96H96 371 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 ST6GAL2Q96JF0 529 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 DPCDQ9BVM2 203 aaPredicted RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 PPA2Q9H2U2 334 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 UNKLQ9H9P5 680 aaKnown RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 SEBOXQ9HB31 216 aaPredicted RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 RANGRFQ9HD47 186 aaPredicted RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 NUDT15Q9NV35 164 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 PLEKHJ1Q9NW61 149 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 BEX4Q9NWD9 120 aaPredicted RBP3.9□□□□□ -1.78
SF3B1-208ENST00000470268 AK3Q9UIJ7 227 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 HSF4Q9ULV5 492 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 ABCA12Q86UK0 2595 aa3.9□□□□□ -1.78
SF3B1-208ENST00000470268 AKAP9Q99996 3911 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 TANC2Q9HCD6 1990 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 A0A0A6YYH2 397 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 TRAV39A0A0B4J263 110 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 IGHV4-61A0A0C4DH41 118 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 A6NJ64 397 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 CYSRT1A8MQ03 144 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 K7N7A8 449 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 ADAM20O43506 726 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 SSX5O60225 188 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 CCNKO75909 580 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 TK1P04183 234 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 MELTFP08582 738 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 WNT2P09544 360 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 GATA3P23771 443 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 MNDAP41218 407 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 GLIPR1P48060 266 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 PDLIM4P50479 330 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 LMO4P61968 165 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 RELQ04864 619 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-208ENST00000470268 AESQ08117 197 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 CLEC12BQ2HXU8 276 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 TMEM155Q4W5P6 130 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 PAN3Q58A45 887 aaKnown RBP3.9□□□□□ -1.79
SF3B1-208ENST00000470268 PLET1Q6UQ28 207 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 PEG10Q86TG7 708 aaKnown RBP3.9□□□□□ -1.79
SF3B1-208ENST00000470268 LRRC75A-AS1Q8N1F1 130 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 DUSP18Q8NEJ0 188 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 OR6F1Q8NGZ6 308 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 CLDND2Q8NHS1 167 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 NUDCD2Q8WVJ2 157 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 MAFIPQ8WZ33 124 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 RAB1CQ92928 201 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF486Q96H40 463 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-208ENST00000470268 MED30Q96HR3 178 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 NUDT16L1Q9BRJ7 211 aaKnown RBP3.9□□□□□ -1.79
SF3B1-208ENST00000470268 DCTN5Q9BTE1 182 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF747Q9BV97 191 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF665Q9H7R5 613 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 HRASLSQ9HDD0 168 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 MYOZ1Q9NP98 299 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-208ENST00000470268 DIABLOQ9NR28 239 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 KAAG1Q9UBP8 84 aa3.9□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF230Q9UIE0 474 aaPredicted RBP3.9□□□□□ -1.79
SF3B1-208ENST00000470268 TRGV11A0A075B6L2 103 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 IGKV1D-8A0A087WSZ0 117 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 MCRIP1C9JLW8 97 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 F5H0A9 414 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-208ENST00000470268 INMT-MINDY4F8WBC2 141 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 NDUFS8O00217 210 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 DVL1O14640 695 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 PHF1O43189 567 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-208ENST00000470268 GSTZ1O43708 216 aaPredicted RBP3.89□□□□□ -1.79
SF3B1-208ENST00000470268 NAPSAO96009 420 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 CSN2P05814 226 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 S100A6P06703 90 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 PTBP1P26599 531 aaKnown RBP eCLIP3.89□□□□□ -1.793e-7■■■□□ 17.4
SF3B1-208ENST00000470268 EDDM3AQ14507 147 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 GRK1Q15835 563 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 Q5PR19 223 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 METTL11BQ5VVY1 283 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 HACD4Q5VWC8 232 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 SHEQ5VZ18 495 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 CLEC2AQ6UVW9 174 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 TCF23Q7RTU1 214 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 CCDC28AQ8IWP9 274 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 GAPTQ8N292 157 aa3.89□□□□□ -1.79
SF3B1-208ENST00000470268 ZNF561Q8N587 486 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms