RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 A0A1B0GU03 582 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 J3QR06 171 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 METTL1Q9UBP6 276 aaKnown RBP7.6□□□□□ -1.19
HPS4-209ENST00000466781 MRPS18BQ9Y676 258 aaKnown RBP7.6□□□□□ -1.19
HPS4-209ENST00000466781 A0A1W2PPE3 182 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 RNASE1P07998 156 aaKnown RBP7.6□□□□□ -1.19
HPS4-209ENST00000466781 PRDX2P32119 198 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 ST3GAL2Q16842 350 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 UNQ9370/PRO34162Q6UXP9 181 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 SAP25Q8TEE9 199 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 CCL28Q9NRJ3 127 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 RGS13O14921 159 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 KCNAB3O43448 404 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 MAS1LP35410 378 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 NSUN5P2Q63ZY6 315 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 ATG4DQ86TL0 474 aaPredicted RBP7.6□□□□□ -1.19
HPS4-209ENST00000466781 OR4A5Q8NH83 315 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 OR4C12Q96R67 309 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 AKIP1Q9NQ31 210 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 SBF1O95248 1867 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 TMEM189A5PLL7 270 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 FFAR1O14842 300 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 PRSS8Q16651 343 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 TSPO2Q5TGU0 170 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 PAXXQ9BUH6 204 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 OR2W1Q9Y3N9 320 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 LOC389332A0A1B0GUA5 103 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 CLDN14O95500 239 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 SURF2Q15527 256 aaPredicted RBP7.6□□□□□ -1.19
HPS4-209ENST00000466781 PIGYQ3MUY2 71 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 TMEM255AQ5JRV8 349 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 STPG3Q8N7X2 389 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 UCN2Q96RP3 112 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 CISD1Q9NZ45 108 aaKnown RBP7.6□□□□□ -1.19
HPS4-209ENST00000466781 MRM2Q9UI43 246 aaKnown RBP7.6□□□□□ -1.19
HPS4-209ENST00000466781 NUMA1Q14980 2115 aa7.6□□□□□ -1.19
HPS4-209ENST00000466781 WNT3P56703 355 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 B2MP61769 119 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 PNRC1Q12796 327 aaPredicted RBP7.59□□□□□ -1.19
HPS4-209ENST00000466781 BSXQ3C1V8 233 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 MRPL54Q6P161 138 aaKnown RBP7.59□□□□□ -1.19
HPS4-209ENST00000466781 MRGPRFQ96AM1 343 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 GUCD1Q96NT3 240 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 CCL13Q99616 98 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 ANKRD20A5PA0PJZ0 165 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 PPYP01298 95 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 SCGB1A1P11684 91 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 ATP5J2P56134 94 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 CCL8P80075 99 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 INSL4Q14641 139 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 FAM106AQ4KMX7 169 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 GCSAMQ8N6F7 178 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 OR2D3Q8NGH3 330 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 PITPNC1Q9UKF7 332 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 ARID2Q68CP9 1835 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 ZNF253O75346 499 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 HYPMO75409 117 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 TMEM33P57088 247 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 UNQ5815/PRO19632Q6UWF5 114 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 TMEM105Q8N8V8 129 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 OR2T10Q8NGZ9 312 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 NEURL2Q9BR09 285 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 ASPDHA6ND91 283 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 A6NDN8 102 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 SOCS1O15524 211 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 CA11O75493 328 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 PSG2P11465 335 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 RPL27AP46776 148 aaKnown RBP7.59□□□□□ -1.19
HPS4-209ENST00000466781 LY6EQ16553 131 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 ZNF343Q6P1L6 599 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 PCSK4Q6UW60 755 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 DNASE2BQ8WZ79 361 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 TUBA4BQ9H853 241 aa7.59□□□□□ -1.19
HPS4-209ENST00000466781 A0A0B4J293 547 aa7.59□□□□□ -1.2
HPS4-209ENST00000466781 FGF9P31371 208 aaPredicted RBP7.59□□□□□ -1.2
HPS4-209ENST00000466781 CRYBB2P43320 205 aa7.59□□□□□ -1.2
HPS4-209ENST00000466781 INPP5JQ15735 1006 aaPredicted RBP7.59□□□□□ -1.2
HPS4-209ENST00000466781 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.59□□□□□ -1.2
HPS4-209ENST00000466781 BVESQ8NE79 360 aa7.59□□□□□ -1.2
HPS4-209ENST00000466781 SOSTQ9BQB4 213 aa7.59□□□□□ -1.2
HPS4-209ENST00000466781 PRR13Q9NZ81 148 aa7.59□□□□□ -1.2
HPS4-209ENST00000466781 VAX2Q9UIW0 290 aa7.59□□□□□ -1.2
HPS4-209ENST00000466781 IGKV3D-11A0A0A0MRZ8 115 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 IGKV3-11P04433 115 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 ATP5G2Q06055 141 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 CD300LDQ6UXZ3 194 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 SLC35E3Q7Z769 313 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 CENPVQ7Z7K6 275 aaPredicted RBP7.58□□□□□ -1.2
HPS4-209ENST00000466781 LSMEM1Q8N8F7 131 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 CYB5R1Q9UHQ9 305 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 AHRRA9YTQ3 701 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 RPL29P47914 159 aaKnown RBP7.58□□□□□ -1.2
HPS4-209ENST00000466781 TMEM251Q8N6I4 163 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 OR10AC1Q8NH08 325 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 ZNF502Q8TBZ5 544 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 OR2V2Q96R30 315 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 RSG1Q9BU20 258 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 ZDHHC8Q9ULC8 765 aa7.58□□□□□ -1.2
HPS4-209ENST00000466781 ZNF256Q9Y2P7 627 aaPredicted RBP7.58□□□□□ -1.2
HPS4-209ENST00000466781 LEUTXA8MZ59 168 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms