RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 GPR84Q9NQS5 396 aa13.15□□□□□ -0.3
SNED1-208ENST00000466618 ZNF701Q9NV72 531 aaPredicted RBP13.15□□□□□ -0.3
SNED1-208ENST00000466618 ST8SIA3O43173 380 aa13.15□□□□□ -0.3
SNED1-208ENST00000466618 NTF4P34130 210 aa13.15□□□□□ -0.3
SNED1-208ENST00000466618 POU3F1Q03052 451 aaPredicted RBP13.15□□□□□ -0.3
SNED1-208ENST00000466618 MRPL49Q13405 166 aaKnown RBP13.15□□□□□ -0.3
SNED1-208ENST00000466618 ZNF880Q6PDB4 577 aa13.15□□□□□ -0.3
SNED1-208ENST00000466618 UEVLDQ8IX04 471 aa13.15□□□□□ -0.3
SNED1-208ENST00000466618 LRTM2Q8N967 370 aa13.15□□□□□ -0.3
SNED1-208ENST00000466618 OR10G4Q8NGN3 311 aa13.15□□□□□ -0.3
SNED1-208ENST00000466618 TMEM171Q8WVE6 324 aa13.15□□□□□ -0.3
SNED1-208ENST00000466618 COL6A6A6NMZ7 2263 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 LOC102723971A0A1B0GUV8 181 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 FAM230AA0A1W2PPH8 454 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 IGSF23A1L1A6 192 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 FAM24AA6NFZ4 105 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 ZNF43P17038 809 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 DUSP1P28562 367 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 BLVRBP30043 206 aaPredicted RBP13.14□□□□□ -0.31
SNED1-208ENST00000466618 TIMP3P35625 211 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 CA7P43166 264 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 ZNF266Q14584 549 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 PPA1Q15181 289 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 CRIP3Q6Q6R5 217 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 KLHL24Q6TFL4 600 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 SLC25A26Q70HW3 274 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 C1QL2Q7Z5L3 287 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 OR4D5Q8NGN0 318 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 ZNF385AQ96PM9 386 aaKnown RBP13.14□□□□□ -0.31
SNED1-208ENST00000466618 GLRX2Q9NS18 164 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 MED29Q9NX70 200 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 SS18L1O75177 396 aaPredicted RBP13.14□□□□□ -0.31
SNED1-208ENST00000466618 PITX3O75364 302 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 GLI4P10075 376 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 ERVFC1-1P60608 527 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 RPL23AP62750 156 aaKnown RBP13.14□□□□□ -0.31
SNED1-208ENST00000466618 GAGE1Q13065 139 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 P2RY6Q15077 328 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 FAM189A2Q15884 450 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 TAF9Q16594 264 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 TSPO2Q5TGU0 170 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 SLC16A14Q7RTX9 510 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 OR10A7Q8NGE5 316 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 GMPPAQ96IJ6 420 aaPredicted RBP13.14□□□□□ -0.31
SNED1-208ENST00000466618 CABLES2Q9BTV7 478 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 SRD5A3Q9H8P0 318 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 RELNP78509 3460 aa13.14□□□□□ -0.31
SNED1-208ENST00000466618 IGKV1-9A0A0C4DH69 117 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 FAM221AA4D161 298 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 SERPINE3A8MV23 424 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 OPN1MWP04001 364 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 METTL15P1P0C7V9 234 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 OPN1MW2P0DN77 364 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 OPN1MW3P0DN78 364 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 CEACAM8P31997 349 aaPredicted RBP13.13□□□□□ -0.31
SNED1-208ENST00000466618 PAX5Q02548 391 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 PNRC1Q12796 327 aaPredicted RBP13.13□□□□□ -0.31
SNED1-208ENST00000466618 IGFBP7Q16270 282 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 DMRTC1Q5HYR2 192 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 LIAT1Q6ZQX7 453 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 P4HA3Q7Z4N8 544 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 THNSL2Q86YJ6 484 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 OR2C3Q8N628 320 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 ASB10Q8WXI3 467 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 TMEM45BQ96B21 275 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 MSI2Q96DH6 328 aaKnown RBP13.13□□□□□ -0.31
SNED1-208ENST00000466618 RBMXL1Q96E39 390 aaKnown RBP13.13□□□□□ -0.31
SNED1-208ENST00000466618 HIST1H2AAQ96QV6 131 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 GPER1Q99527 375 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 HDHD3Q9BSH5 251 aaPredicted RBP13.13□□□□□ -0.31
SNED1-208ENST00000466618 XKRY2A2RUG3 117 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 ZNF732B4DXR9 585 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 E9PLN8 166 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 PDLIM4P50479 330 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 C17orf78Q8N4C9 275 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 OR5D18Q8NGL1 313 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 RTN4IP1Q8WWV3 396 aaPredicted RBP13.13□□□□□ -0.31
SNED1-208ENST00000466618 C11orf40Q8WZ69 217 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 KCNK17Q96T54 332 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 VKORC1Q9BQB6 163 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 OPN3Q9H1Y3 402 aaPredicted RBP13.13□□□□□ -0.31
SNED1-208ENST00000466618 HIPK2Q9H2X6 1198 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 VAX2Q9UIW0 290 aa13.13□□□□□ -0.31
SNED1-208ENST00000466618 SVILO95425 2214 aa13.12□□□□□ -0.31
SNED1-208ENST00000466618 TMEM210A6NLX4 147 aa13.12□□□□□ -0.31
SNED1-208ENST00000466618 A6NNC1 897 aa13.12□□□□□ -0.31
SNED1-208ENST00000466618 EPHA1P21709 976 aa13.12□□□□□ -0.31
SNED1-208ENST00000466618 DAP3P51398 398 aaKnown RBP13.12□□□□□ -0.31
SNED1-208ENST00000466618 MRPS11P82912 194 aaKnown RBP13.12□□□□□ -0.31
SNED1-208ENST00000466618 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
SNED1-208ENST00000466618 ABHD12BQ7Z5M8 362 aaPredicted RBP13.12□□□□□ -0.31
SNED1-208ENST00000466618 OR2AJ1Q8NGZ0 328 aa13.12□□□□□ -0.31
SNED1-208ENST00000466618 TOMM40LQ969M1 308 aa13.12□□□□□ -0.31
SNED1-208ENST00000466618 MRPL13Q9BYD1 178 aaKnown RBP13.12□□□□□ -0.31
SNED1-208ENST00000466618 SDF2L1Q9HCN8 221 aa13.12□□□□□ -0.31
SNED1-208ENST00000466618 ZNF319Q9P2F9 582 aa13.12□□□□□ -0.31
SNED1-208ENST00000466618 KIAA1549Q9HCM3 1950 aa13.12□□□□□ -0.31
SNED1-208ENST00000466618 TRGV8A0A0C4DH27 118 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms