RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 CHMP1AQ9HD42 196 aaPredicted RBP13.83□□□□□ -0.2
COL7A1-206ENST00000466591 GHRLQ9UBU3 117 aa13.83□□□□□ -0.2
COL7A1-206ENST00000466591 SLC31A2O15432 143 aa13.82□□□□□ -0.2
COL7A1-206ENST00000466591 OR5H8P0DN80 308 aa13.82□□□□□ -0.2
COL7A1-206ENST00000466591 RCC1P18754 421 aaPredicted RBP13.82□□□□□ -0.2
COL7A1-206ENST00000466591 VHLP40337 213 aa13.82□□□□□ -0.2
COL7A1-206ENST00000466591 GP2P55259 537 aaKnown RBP13.82□□□□□ -0.2
COL7A1-206ENST00000466591 GABPB1Q06547 395 aaPredicted RBP13.82□□□□□ -0.2
COL7A1-206ENST00000466591 EBI3Q14213 229 aa13.82□□□□□ -0.2
COL7A1-206ENST00000466591 MMDQ15546 238 aa13.82□□□□□ -0.2
COL7A1-206ENST00000466591 GLT8D1Q68CQ7 371 aa13.82□□□□□ -0.2
COL7A1-206ENST00000466591 FAM53AQ6NSI3 398 aaPredicted RBP13.82□□□□□ -0.2
COL7A1-206ENST00000466591 OR8U1Q8NH10 309 aa13.82□□□□□ -0.2
COL7A1-206ENST00000466591 ABHD14AQ9BUJ0 271 aa13.82□□□□□ -0.2
COL7A1-206ENST00000466591 TMED9Q9BVK6 235 aa13.82□□□□□ -0.2
COL7A1-206ENST00000466591 K7EIL1 84 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 CCL24O00175 119 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 PDCD6O75340 191 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 GLAP06280 429 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 GNAO1P09471 354 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 UBBP0CG47 229 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 SLC2A2P11168 524 aaPredicted RBP13.81□□□□□ -0.2
COL7A1-206ENST00000466591 TMEM65Q6PI78 240 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 C18orf65Q6ZTR6 163 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 Q8N9W7 124 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 TMEM104Q8NE00 496 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 GALMQ96C23 342 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 DUX3Q96PT4 197 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 ZNF251Q9BRH9 671 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 SCN3BQ9NY72 215 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 STEAP1Q9UHE8 339 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 PSORS1C1Q9UIG5 152 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 ZNF107Q9UII5 783 aaPredicted RBP13.81□□□□□ -0.2
COL7A1-206ENST00000466591 JPT1Q9UK76 154 aa13.81□□□□□ -0.2
COL7A1-206ENST00000466591 ZNF736B4DX44 427 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-206ENST00000466591 RPLP1P05386 114 aaKnown RBP13.8□□□□□ -0.2
COL7A1-206ENST00000466591 ACSM3Q53FZ2 586 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 CT45A1Q5HYN5 189 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 ETV3LQ6ZN32 361 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 LCNL1Q6ZST4 164 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 MS4A15Q8N5U1 240 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 NANOGP1Q8N7R0 232 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 OR2AK2Q8NG84 335 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 OR52L2PQ8NGH6 319 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 OR5M8Q8NGP6 311 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 CT45A3Q8NHU0 189 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 IL1F10Q8WWZ1 152 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 ST6GALNAC6Q969X2 333 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 Q96M66 194 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 KIAA1456Q9P272 454 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 LRRC42Q9Y546 428 aa13.8□□□□□ -0.2
COL7A1-206ENST00000466591 WI2-2373I1.2A0A1W2PRP0 233 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 LINC01548A6NM66 108 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 PTGES3LE9PB15 166 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 ELANEP08246 267 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 PPP1CCP36873 323 aaKnown RBP13.79□□□□□ -0.2
COL7A1-206ENST00000466591 KRTAP10-11P60412 298 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 DGCR2P98153 550 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 FOXE3Q13461 319 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 PLGLAQ15195 96 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 MED22Q15528 200 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 VAX1Q5SQQ9 334 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 STEAP3Q658P3 488 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 ZNF554Q86TJ5 538 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 Q8N6K4 173 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 ZNF485Q8NCK3 441 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 TMEM59Q9BXS4 323 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 DCLRE1BQ9H816 532 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL7A1-206ENST00000466591 PLCXD1Q9NUJ7 323 aa13.79□□□□□ -0.2
COL7A1-206ENST00000466591 H0YHG0 523 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 LANCL1O43813 399 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 CD1AP06126 327 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 ZNF134P52741 427 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 ZNF137PP52743 207 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 LSAMPQ13449 338 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 GNMTQ14749 295 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 DEFB136Q30KP8 78 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 MORN2Q502X0 79 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 HSD17B12Q53GQ0 312 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 ZNF439Q8NDP4 499 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 PARP11Q9NR21 331 aa13.78□□□□□ -0.2
COL7A1-206ENST00000466591 SC5DO75845 299 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 F2RL1P55085 397 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 ACTBP60709 375 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 EGFEM1PQ0D2K5 195 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 CEACAM19Q7Z692 300 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 KCNG3Q8TAE7 436 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 MRPL30Q8TCC3 161 aaKnown RBP13.77□□□□□ -0.21
COL7A1-206ENST00000466591 ABHD5Q8WTS1 349 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 UFD1Q92890 307 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 RAX2Q96IS3 184 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 KCTD7Q96MP8 289 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 HSPB9Q9BQS6 159 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 PLGRKTQ9HBL7 147 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 PLEKHJ1Q9NW61 149 aa13.77□□□□□ -0.21
COL7A1-206ENST00000466591 RAMP3O60896 148 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 CDK1P06493 297 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 HSMCR30P0CW71 290 aa13.76□□□□□ -0.21
COL7A1-206ENST00000466591 HTR2CP28335 458 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms