RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 RSL24D1Q9UHA3 163 aaKnown RBP5.66□□□□□ -1.5
CLDN4-204ENST00000466411 KIF25Q9UIL4 384 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 JPT1Q9UK76 154 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 FAM96BQ9Y3D0 163 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 POMT1Q9Y6A1 747 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 MINOS1-NBL1R4GNA1 71 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 A3GALT2U3KPV4 340 aa5.66□□□□□ -1.5
CLDN4-204ENST00000466411 A0A075B6Q4 140 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 A0A1B0GW55 424 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 A0A1W2PP11 408 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 NPIPB11E5RHQ5 1161 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 H3BMQ9 156 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 RAB27BO00194 218 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 F2RL2O00254 374 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 XRCC3O43542 346 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 MT-ND4P03905 459 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 DUX4L2P0CJ85 424 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 DUX4L3P0CJ86 424 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 DUX4L4P0CJ87 422 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 DUX4L5P0CJ88 424 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 DUX4L6P0CJ89 424 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 DUX4L7P0CJ90 424 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 CDK2P24941 298 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 GLIPR1P48060 266 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 RAB7AP51149 207 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 DLX6P56179 175 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 CLDN12P56749 244 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 GNG2P59768 71 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 LSM3P62310 102 aaKnown RBP5.65□□□□□ -1.5
CLDN4-204ENST00000466411 UBA52P62987 128 aaKnown RBP5.65□□□□□ -1.5
CLDN4-204ENST00000466411 ARFRP1Q13795 201 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 BEAN1Q3B7T3 259 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 TMEM69Q5SWH9 247 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 HACD4Q5VWC8 232 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 FOXB2Q5VYV0 432 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 DUX4L9Q6RFH8 374 aaPredicted RBP5.65□□□□□ -1.5
CLDN4-204ENST00000466411 RNF144BQ7Z419 303 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 NR2C2APQ86WQ0 139 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 SAMD12Q8N8I0 201 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 OR4M1Q8NGD0 313 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 OR5R1Q8NH85 324 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 OR9G1Q8NH87 305 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 LHX4Q969G2 390 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 BORCS5Q969J3 196 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 MALSU1Q96EH3 234 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 PECRQ9BY49 303 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 DPAGT1Q9H3H5 408 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 SCPEP1Q9HB40 452 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 RAB18Q9NP72 206 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 IDI2-AS1Q9NZ38 188 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 DUX4Q9UBX2 424 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 PITPNC1Q9UKF7 332 aa5.65□□□□□ -1.5
CLDN4-204ENST00000466411 PLXNB1O43157 2135 aa5.65□□□□□ -1.51
CLDN4-204ENST00000466411 IGHV2-26A0A0B4J1V2 119 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 CENPVL3A0A0U1RRI6 287 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 FOXI3A8MTJ6 420 aaPredicted RBP5.64□□□□□ -1.51
CLDN4-204ENST00000466411 LEUTXA8MZ59 168 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 CLDN34H7C241 214 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 SULT1C2O00338 296 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 MFNGO00587 321 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 ITGB1BP1O14713 200 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 NPFFO15130 113 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 SLC22A5O76082 557 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 MELTFP08582 738 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 SLC2A2P11168 524 aaPredicted RBP5.64□□□□□ -1.51
CLDN4-204ENST00000466411 ZBTB25P24278 435 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 BRS3P32247 399 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 S100A5P33763 92 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 ACTBP60709 375 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 HOXA4Q00056 320 aaPredicted RBP5.64□□□□□ -1.51
CLDN4-204ENST00000466411 SSBP1Q04837 148 aaKnown RBP5.64□□□□□ -1.51
CLDN4-204ENST00000466411 SRSF4Q08170 494 aaKnown RBP5.64□□□□□ -1.51
CLDN4-204ENST00000466411 ZNF273Q14593 569 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 PLA1AQ53H76 456 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 ZNF626Q68DY1 528 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 SIGIRRQ6IA17 410 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 OR10K2Q6IF99 312 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 C11orf87Q6NUJ2 197 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 FAM71F2Q6NXP2 309 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 ZNF880Q6PDB4 577 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 LINC00299Q6ZSB3 139 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 C6orf201Q7Z4U5 140 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 LDLRAD3Q86YD5 345 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 Q8N7P7 452 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 OR4A4PQ8NGN8 299 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 PLPPR1Q8TBJ4 325 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 MRPL30Q8TCC3 161 aaKnown RBP5.64□□□□□ -1.51
CLDN4-204ENST00000466411 MRGPRDQ8TDS7 321 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 SSMEM1Q8WWF3 244 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 ARL11Q969Q4 196 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 DGCR14Q96DF8 476 aaKnown RBP5.64□□□□□ -1.51
CLDN4-204ENST00000466411 ARHGAP5-AS1Q96IT6 56 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 KIRREL1Q96J84 757 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 TBX15Q96SF7 602 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 SULT4A1Q9BR01 284 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 NICN1Q9BSH3 213 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 PRDM13Q9H4Q3 707 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 TAF9BQ9HBM6 251 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 ZNF286AQ9HBT8 521 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 GNG12Q9UBI6 72 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms