RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CABLES2Q9BTV7 478 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 POLDIP2Q9Y2S7 368 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 NSG2Q9Y328 171 aa12.2□□□□□ -0.46
COL5A1-205ENST00000464187 SIRPB1O00241 398 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 SLC33A1O00400 549 aaPredicted RBP12.19□□□□□ -0.46
COL5A1-205ENST00000464187 HSD17B6O14756 317 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 SPRY3O43610 288 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 OR2H2O95918 312 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 PLAUP00749 431 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 PRAMEF6Q5VXH4 476 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 BOLLQ8N9W6 283 aaKnown RBP12.19□□□□□ -0.46
COL5A1-205ENST00000464187 OR4D5Q8NGN0 318 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 PLPPR1Q8TBJ4 325 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 MARC2Q969Z3 335 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 TMEM56Q96MV1 263 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 MS4A7Q9GZW8 240 aaPredicted RBP12.19□□□□□ -0.46
COL5A1-205ENST00000464187 PLEKHA2Q9HB19 425 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 TAF9BQ9HBM6 251 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 CCL28Q9NRJ3 127 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 ZDHHC8Q9ULC8 765 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 RNF115Q9Y4L5 304 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 TMEM56-RWDD3S4R434 201 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 ROS1P08922 2347 aa12.19□□□□□ -0.46
COL5A1-205ENST00000464187 ZNF462Q96JM2 2506 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 VSTM5A8MXK1 200 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 DEFB108AA8MXU0 73 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 E7EQL1 145 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 MDH2P40926 338 aaKnown RBP12.18□□□□□ -0.46
COL5A1-205ENST00000464187 TMEM33P57088 247 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 EIF5AP63241 154 aaKnown RBP12.18□□□□□ -0.46
COL5A1-205ENST00000464187 MZT1Q08AG7 82 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 C11orf53Q8IXP5 236 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 H1FOOQ8IZA3 346 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-205ENST00000464187 SELENOHQ8IZQ5 122 aaKnown RBP12.18□□□□□ -0.46
COL5A1-205ENST00000464187 BPIFCQ8NFQ6 507 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 ERGIC1Q969X5 290 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 BSCL2Q96G97 398 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-205ENST00000464187 UBE2J1Q9Y385 318 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-205ENST00000464187 CHD3Q12873 2000 aaKnown RBP12.18□□□□□ -0.46
COL5A1-205ENST00000464187 RAB19A4D1S5 217 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 A6NLC8 198 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 NXPH2O95156 264 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 GAPDHP04406 335 aaKnown RBP12.18□□□□□ -0.46
COL5A1-205ENST00000464187 CD200P41217 278 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 MST1LQ2TV78 715 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 ZNF497Q6ZNH5 498 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 LILRB1Q8NHL6 650 aaPredicted RBP12.18□□□□□ -0.46
COL5A1-205ENST00000464187 KIRREL1Q96J84 757 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 OR2V2Q96R30 315 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 SMIM3Q9BZL3 60 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 TLNRD1Q9H1K6 362 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 UFSP2Q9NUQ7 469 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 TREM2Q9NZC2 230 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 LPAR3Q9UBY5 353 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 RCL1Q9Y2P8 373 aaKnown RBP12.18□□□□□ -0.46
COL5A1-205ENST00000464187 POMT1Q9Y6A1 747 aa12.18□□□□□ -0.46
COL5A1-205ENST00000464187 ICE1Q9Y2F5 2266 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 SIGLEC5O15389 551 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 ST8SIA3O43173 380 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 GPR137BO60478 399 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 UCP1P25874 307 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 ZNF146Q15072 292 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 SHEQ5VZ18 495 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 ZNF826PQ6ZT77 177 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 MOB1BQ7L9L4 216 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 ZNF695Q8IW36 515 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.17□□□□□ -0.46
COL5A1-205ENST00000464187 DMBX1Q8NFW5 382 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 OR10J5Q8NHC4 309 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 ZFP57Q9NU63 452 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 OR2W1Q9Y3N9 320 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 KIAA2026Q5HYC2 2103 aa12.17□□□□□ -0.46
COL5A1-205ENST00000464187 TRAV39A0A0B4J263 110 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 ZNF705EA8MWA4 302 aaPredicted RBP12.16□□□□□ -0.46
COL5A1-205ENST00000464187 NPIPB11E5RHQ5 1161 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 C19orf84I3L1E1 186 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 CDS2O95674 445 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 PTBP3O95758 552 aaKnown RBP12.16□□□□□ -0.46
COL5A1-205ENST00000464187 IGHV1-46P01743 117 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 LOXP28300 417 aaPredicted RBP12.16□□□□□ -0.46
COL5A1-205ENST00000464187 APOBEC3AP31941 199 aaPredicted RBP12.16□□□□□ -0.46
COL5A1-205ENST00000464187 UQCC3Q6UW78 93 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 CLEC9AQ6UXN8 241 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 WDR82Q6UXN9 313 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 ARL11Q969Q4 196 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 MEGF10Q96KG7 1140 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 C11orf1Q9H5F2 150 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 HES4Q9HCC6 221 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 CISD1Q9NZ45 108 aaKnown RBP12.16□□□□□ -0.46
COL5A1-205ENST00000464187 HCFC1P51610 2035 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 H0Y980 276 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 TNFSF12O43508 249 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 JTBO76095 146 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 P2RY1P47900 373 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 SPRNQ5BIV9 151 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 CMTM1Q8IZ96 169 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 SMIM8Q96KF7 97 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 TMEM204Q9BSN7 226 aa12.16□□□□□ -0.46
COL5A1-205ENST00000464187 PLA2G2EQ9NZK7 142 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms