RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 HTR1DP28221 377 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 CLDN12P56749 244 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 EGFEM1PQ0D2K5 195 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 P2RY14Q15391 338 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 LTC4SQ16873 150 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR52W1Q6IF63 320 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 C10orf99Q6UWK7 81 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 ETV3LQ6ZN32 361 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR2W3Q7Z3T1 314 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 C5orf24Q7Z6I8 188 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR5AU1Q8NGC0 362 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR10A7Q8NGE5 316 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 RFESDQ8TAC1 157 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 NDNFQ8TB73 568 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 ZNF596Q8TC21 504 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 MRPL30Q8TCC3 161 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 CCDC107Q8WV48 283 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 FCGR1BQ92637 280 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 SULT4A1Q9BR01 284 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 CST11Q9H112 138 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 MBNL3Q9NUK0 354 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 GFOD1Q9NXC2 390 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 ETAA1Q9NY74 926 aa6.3□□□□□ -1.4
CDC42BPA-210ENST00000462553 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 TMEM272A0A1B0GTI8 110 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 A0A1W2PPI3 338 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 UBE2QL1A1L167 161 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 MCRIP1C9JLW8 97 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 BUB1B-PAK6H3BSN5 160 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 J3QR06 171 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 AIPO00170 330 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 SOCS1O15524 211 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 PEX14O75381 377 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 IGHV3-7P01780 117 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 AMY1AP04745 511 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 AMY2AP04746 511 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 PF4V1P10720 104 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 RCC1P18754 421 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 TMEM50BP56557 158 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 DIAPH2-AS1Q14236 149 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 RBM39Q14498 530 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 RAB11BQ15907 218 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 NKAPLQ5M9Q1 402 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 TPTE2P1Q5T6R2 138 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 SYT6Q5T7P8 510 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 HES5Q5TA89 166 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 C22orf42Q6IC83 251 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 ZNF880Q6PDB4 577 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 C6orf201Q7Z4U5 140 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 FAM89BQ8N5H3 189 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 LINC00482Q8N8I6 264 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 ZNF565Q8N9K5 539 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 ZNF439Q8NDP4 499 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR51D1Q8NGF3 324 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR4K15Q8NH41 348 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR9G1Q8NH87 305 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR1L1Q8NH94 360 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 KCNG3Q8TAE7 436 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 NEK7Q8TDX7 302 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 ARL11Q969Q4 196 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 RCC1LQ96I51 464 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 PLGRKTQ9HBL7 147 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 BIRC6Q9NR09 4857 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 TXNL4BQ9NX01 149 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 DPM3Q9P2X0 92 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 PSG11Q9UQ72 335 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 V9GY05 133 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 SORL1Q92673 2214 aa6.29□□□□□ -1.4
CDC42BPA-210ENST00000462553 IGHV3-43A0A0B4J1X8 118 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 A0A0B4J203 849 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 A0A1W2PPE3 182 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 SMIM30A4D0T7 59 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 SH2D7A6NKC9 451 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 TRIM64CA6NLI5 447 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 SLC31A2O15432 143 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 ORC5O43913 435 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 CA11O75493 328 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 NAPSAO96009 420 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 HBZP02008 142 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 PF4P02776 101 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 IGHV3-43DP0DP04 118 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 ARSBP15848 533 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 GZMHP20718 246 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 CD24P25063 80 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 HOXD3P31249 432 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 FGF9P31371 208 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 GNG10P50151 68 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 GNMTQ14749 295 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 ARSJQ5FYB0 599 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 C16orf82Q7Z2V1 217 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 Q8N3U1 123 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 LINC00311Q8N616 119 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR52M1Q8NGK5 317 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 FAM3DQ96BQ1 224 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 B9D2Q9BPU9 175 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 HDHD3Q9BSH5 251 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 FAAP24Q9BTP7 215 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 OR51E2Q9H255 320 aa6.28□□□□□ -1.4
CDC42BPA-210ENST00000462553 RNF167Q9H6Y7 350 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms