RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 LHX4Q969G2 390 aa13.26□□□□□ -0.29
SSR4-206ENST00000460616 ANAPC16Q96DE5 110 aa13.26□□□□□ -0.29
SSR4-206ENST00000460616 SLC39A9Q9NUM3 307 aa13.26□□□□□ -0.29
SSR4-206ENST00000460616 LILRA5A6NI73 299 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 ZNF705FA8MVS1 300 aaPredicted RBP13.25□□□□□ -0.29
SSR4-206ENST00000460616 HPRT1P00492 218 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 LINC00614P0C842 121 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 ZNF705DP0CH99 300 aaPredicted RBP13.25□□□□□ -0.29
SSR4-206ENST00000460616 ZNF705BP0CI00 300 aaPredicted RBP13.25□□□□□ -0.29
SSR4-206ENST00000460616 ZNF295-AS1Q8N0V1 137 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 NABP1Q96AH0 204 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 CCL28Q9NRJ3 127 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 EP300Q09472 2414 aaPredicted RBP13.25□□□□□ -0.29
SSR4-206ENST00000460616 UNC13CQ8NB66 2214 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 IGKV1D-13A0A0B4J2D9 117 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 LOC102725191A0A1B0GVB3 256 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 SLC22A20A6NK97 555 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 CNOT4O95628 575 aaKnown RBP13.25□□□□□ -0.29
SSR4-206ENST00000460616 IGKV1-13P0DP09 117 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 TLE1Q04724 770 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 IL22RA2Q969J5 263 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 PINX1Q96BK5 328 aaKnown RBP13.25□□□□□ -0.29
SSR4-206ENST00000460616 MS4A10Q96PG2 267 aa13.25□□□□□ -0.29
SSR4-206ENST00000460616 TYMSP04818 313 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 RBM11P57052 281 aaKnown RBP13.24□□□□□ -0.29
SSR4-206ENST00000460616 LRRC75BQ2VPJ9 315 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 C10orf128Q5T292 105 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 C17orf82Q86X59 251 aaPredicted RBP13.24□□□□□ -0.29
SSR4-206ENST00000460616 ZNF525Q8N782 197 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 GPR146Q96CH1 333 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 LOXL4Q96JB6 756 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 PARLQ9H300 379 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 IL36GQ9NZH8 169 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 A0A0G2JRQ6 117 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 TP53I11O14683 189 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 SCTP09683 121 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 SRP14P37108 136 aaKnown RBP13.24□□□□□ -0.29
SSR4-206ENST00000460616 WNT5AP41221 380 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 PSMB3P49720 205 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 ZNF92Q03936 586 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 ARL16Q0P5N6 197 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 TESK1Q15569 626 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 MRPL30Q8TCC3 161 aaKnown RBP13.24□□□□□ -0.29
SSR4-206ENST00000460616 TBX15Q96SF7 602 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 METTL7AQ9H8H3 244 aa13.24□□□□□ -0.29
SSR4-206ENST00000460616 MRPS18CQ9Y3D5 142 aaKnown RBP13.24□□□□□ -0.29
SSR4-206ENST00000460616 KIAA1324LA8MWY0 1029 aaPredicted RBP13.23□□□□□ -0.29
SSR4-206ENST00000460616 H0Y980 276 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 TMEM250H0YL14 139 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 TOX3O15405 576 aaPredicted RBP13.23□□□□□ -0.29
SSR4-206ENST00000460616 RNPS1Q15287 305 aaKnown RBP13.23□□□□□ -0.29
SSR4-206ENST00000460616 RABEPKQ7Z6M1 372 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 MRPL52Q86TS9 123 aaKnown RBP13.23□□□□□ -0.29
SSR4-206ENST00000460616 BATF2Q8N1L9 274 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 COL5A1P20908 1838 aaPredicted RBP13.23□□□□□ -0.29
SSR4-206ENST00000460616 LY6G6EA0A0G2JKS1 128 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 DHHO43323 396 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 PGLYRP1O75594 196 aaPredicted RBP13.23□□□□□ -0.29
SSR4-206ENST00000460616 CER1O95813 267 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 LCATP04180 440 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 IRF2P14316 349 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 KCNIP4Q6PIL6 250 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 TMEM256Q8N2U0 113 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 EXTL1Q92935 676 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 OPN3Q9H1Y3 402 aaPredicted RBP13.23□□□□□ -0.29
SSR4-206ENST00000460616 PSENENQ9NZ42 101 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 U3KQA8 63 aa13.23□□□□□ -0.29
SSR4-206ENST00000460616 FUT6P51993 359 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 IZUMO4Q1ZYL8 232 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 ARSJQ5FYB0 599 aaPredicted RBP13.22□□□□□ -0.29
SSR4-206ENST00000460616 RPP25LQ8N5L8 163 aaKnown RBP13.22□□□□□ -0.29
SSR4-206ENST00000460616 TMEM54Q969K7 222 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 GYPAP02724 150 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 IAPPP10997 89 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 HBG1P69891 147 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 HBG2P69892 147 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 MRPS11P82912 194 aaKnown RBP13.22□□□□□ -0.29
SSR4-206ENST00000460616 Q6ZS49 121 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 FOXL2NBQ6ZUU3 175 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 SDSLQ96GA7 329 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 PARD6AQ9NPB6 346 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 TRAPPC1Q9Y5R8 145 aa13.22□□□□□ -0.29
SSR4-206ENST00000460616 NCOA6Q14686 2063 aaPredicted RBP13.22□□□□□ -0.29
SSR4-206ENST00000460616 A0A1B0GX78 115 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 SYNGR2O43760 224 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 SERPINE2P07093 398 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 F2RP25116 425 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 PTGDSP41222 190 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 PRDX4Q13162 271 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 FAM69BQ5VUD6 431 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 DMRTA1Q5VZB9 504 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 CST9LP1Q5W188 147 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 TMEM42Q69YG0 159 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 OR10G3Q8NGC4 313 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 OR4F5Q8NH21 305 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 RNF138Q8WVD3 245 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 ZCCHC14Q8WYQ9 949 aaKnown RBP13.21□□□□□ -0.29
SSR4-206ENST00000460616 ZNF385AQ96PM9 386 aaKnown RBP13.21□□□□□ -0.29
SSR4-206ENST00000460616 OR4F4Q96R69 305 aa13.21□□□□□ -0.29
SSR4-206ENST00000460616 DIRC2Q96SL1 478 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms