RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 WNT5BQ9H1J7 359 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 DBX1A6NMT0 343 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 SEC14L6B5MCN3 397 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 J3QRE1 110 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 NAT1P18440 290 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 RUNX1Q01196 453 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 KHDC3LQ587J8 217 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 FAM78BQ5VT40 261 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 PUSL1Q8N0Z8 303 aaKnown RBP12.76□□□□□ -0.37
PTPRU-205ENST00000460170 TMEM54Q969K7 222 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 PRDM14Q9GZV8 571 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 SIRT7Q9NRC8 400 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 NAT8BQ9UHF3 227 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 ZSWIM8A7E2V4 1837 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 LOC390937A0A1W2PQ73 354 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 SYNGR1O43759 233 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 CD8AP01732 235 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 CHCHD2Q9Y6H1 151 aaPredicted RBP12.76□□□□□ -0.37
PTPRU-205ENST00000460170 LAMTOR1Q6IAA8 161 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 RBP4P02753 201 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 ERVS71-1P61550 626 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 DPPA3Q6W0C5 159 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 OR2T6Q8NHC8 308 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 ONECUT1Q9UBC0 465 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 CEP250Q9BV73 2442 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 CTXND1A0A1B0GTU2 59 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 GNB2P62879 340 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 PAX5Q02548 391 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 FNDC7Q5VTL7 733 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 SLC16A13Q7RTY0 426 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 ZNF71Q9NQZ8 489 aaPredicted RBP12.75□□□□□ -0.37
PTPRU-205ENST00000460170 SCN5AQ14524 2016 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 C1QL1O75973 258 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 PRRX1P54821 245 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 TMEM167BQ9NRX6 74 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 TREM2Q9NZC2 230 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 ARHGEF17Q96PE2 2063 aaPredicted RBP12.75□□□□□ -0.37
PTPRU-205ENST00000460170 SERTM2A0A1B0GWG4 89 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 SERF2P84101 59 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 NCMAPQ5T1S8 102 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 H1FOOQ8IZA3 346 aaPredicted RBP12.75□□□□□ -0.37
PTPRU-205ENST00000460170 SSMEM1Q8WWF3 244 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 ZNF665Q9H7R5 613 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 COX5BP10606 129 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 SUMO1P63165 101 aaKnown RBP12.75□□□□□ -0.37
PTPRU-205ENST00000460170 HIST1H3AP68431 136 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 IQCJQ1A5X6 159 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 CXorf66Q5JRM2 361 aaPredicted RBP12.75□□□□□ -0.37
PTPRU-205ENST00000460170 ABHD14BQ96IU4 210 aa12.75□□□□□ -0.37
PTPRU-205ENST00000460170 SIGLEC5O15389 551 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 SPINK4O60575 86 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 OR2H2O95918 312 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 MELTFP08582 738 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 PRDX2P32119 198 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 TIPARPQ7Z3E1 657 aaKnown RBP12.74□□□□□ -0.37
PTPRU-205ENST00000460170 OR1L4Q8NGR5 311 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 BARX1Q9HBU1 254 aaPredicted RBP12.74□□□□□ -0.37
PTPRU-205ENST00000460170 WDR81Q562E7 1941 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 ASXL3Q9C0F0 2248 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 FCN1O00602 326 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 PAGE4O60829 102 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 SLC25A5P05141 298 aaKnown RBP12.74□□□□□ -0.37
PTPRU-205ENST00000460170 FAM74A3Q4VXF1 159 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 CDCP2Q5VXM1 449 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 C1orf174Q8IYL3 243 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 PKIBQ9C010 78 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 SAP30LQ9HAJ7 183 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 SEBOXQ9HB31 216 aaPredicted RBP12.74□□□□□ -0.37
PTPRU-205ENST00000460170 TECRQ9NZ01 308 aaKnown RBP12.74□□□□□ -0.37
PTPRU-205ENST00000460170 DOK5Q9P104 306 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 CLN8Q9UBY8 286 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 WIPI2Q9Y4P8 454 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 COL10A1Q03692 680 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 SAXO1Q8IYX7 474 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 ANAPC16Q96DE5 110 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 LOXL4Q96JB6 756 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 PRNDQ9UKY0 176 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 CBY1Q9Y3M2 126 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 FAM90A27PA6NNH2 459 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 NCBP2LA6PVI3 153 aaKnown RBP12.74□□□□□ -0.37
PTPRU-205ENST00000460170 COX7A1P24310 79 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 PPP1R32Q7Z5V6 425 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 TPRX1Q8N7U7 411 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 HES7Q9BYE0 225 aa12.74□□□□□ -0.37
PTPRU-205ENST00000460170 BTCP35070 178 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 AKIRIN1Q9H9L7 192 aaPredicted RBP12.73□□□□□ -0.37
PTPRU-205ENST00000460170 DLL3Q9NYJ7 618 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 OR10A7Q8NGE5 316 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 MRPL30Q8TCC3 161 aaKnown RBP12.73□□□□□ -0.37
PTPRU-205ENST00000460170 BCL2L2Q92843 193 aaPredicted RBP12.73□□□□□ -0.37
PTPRU-205ENST00000460170 PIPOXQ9P0Z9 390 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 DICER1Q9UPY3 1922 aaKnown RBP12.73□□□□□ -0.37
PTPRU-205ENST00000460170 TRAV20A0A0B4J274 112 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 UBE2L3P68036 154 aaKnown RBP12.73□□□□□ -0.37
PTPRU-205ENST00000460170 RNF24Q9Y225 148 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 IGHV3OR15-7A0A075B7D8 119 aa12.73□□□□□ -0.37
PTPRU-205ENST00000460170 ELOA3CA0A087WX78 387 aaPredicted RBP12.73□□□□□ -0.37
PTPRU-205ENST00000460170 PGLYRP1O75594 196 aaPredicted RBP12.73□□□□□ -0.37
PTPRU-205ENST00000460170 HBZP02008 142 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms