RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 FAM90A5PA8MXJ8 464 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 FAM90A23PA8MXZ1 464 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 CYB5BO43169 146 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 IGKV1-5P01602 117 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 TFF1P04155 84 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 SERPINE2P07093 398 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 FAM90A15PP0C7V4 464 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 FAM90A13PP0C7W8 464 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 FAM90A14PP0C7W9 464 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 FAM90A24PP0C7X0 464 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 MMP9P14780 707 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 RAB11AP62491 216 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 NKX6-1P78426 367 aaPredicted RBP12□□□□□ -0.49
SCFD1-203ENST00000458591 BEND4Q6ZU67 534 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 OR13D1Q8NGV5 346 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 SSX3Q99909 188 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 IGKV3D-15A0A087WSY6 115 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 HMGB3O15347 200 aaKnown RBP12□□□□□ -0.49
SCFD1-203ENST00000458591 TRGC2P03986 189 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 CEBPDP49716 269 aaPredicted RBP12□□□□□ -0.49
SCFD1-203ENST00000458591 ERVS71-1P61550 626 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 DEFA6Q01524 100 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 SSPNQ14714 243 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 ZNF600Q6ZNG1 722 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 H1FOOQ8IZA3 346 aaPredicted RBP12□□□□□ -0.49
SCFD1-203ENST00000458591 FAM58AQ8N1B3 248 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 FOXJ2Q9P0K8 574 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 ZFHX4Q86UP3 3567 aa12□□□□□ -0.49
SCFD1-203ENST00000458591 ELOA3CA0A087WX78 387 aaPredicted RBP11.99□□□□□ -0.49
SCFD1-203ENST00000458591 A0A1W2PNU3 283 aaPredicted RBP11.99□□□□□ -0.49
SCFD1-203ENST00000458591 PPP1R2P9O14990 202 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 TDGF1P13385 188 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 HLA-DRB3P79483 266 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 IL24Q13007 206 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 TESK1Q15569 626 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 ALKBH6Q3KRA9 238 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 C4orf17Q53FE4 359 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 C9orf152Q5JTZ5 239 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 WDR86Q86TI4 376 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 OR5A2Q8NGI9 324 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 TTTY12Q9BZ98 90 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 GFOD1Q9NXC2 390 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 BOKQ9UMX3 212 aaPredicted RBP11.99□□□□□ -0.49
SCFD1-203ENST00000458591 ESPL1Q14674 2120 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 LOC102723971A0A1B0GUV8 181 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 B4DEV8 164 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 WDR1O75083 606 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 SS18L1O75177 396 aaPredicted RBP11.99□□□□□ -0.49
SCFD1-203ENST00000458591 MT-CO3P00414 261 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 CELA3BP08861 270 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 CEACAM1P13688 526 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 GLIPR1P48060 266 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 DUSP3P51452 185 aaPredicted RBP11.99□□□□□ -0.49
SCFD1-203ENST00000458591 ELLP55199 621 aaPredicted RBP11.99□□□□□ -0.49
SCFD1-203ENST00000458591 KHDC3LQ587J8 217 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 SAXO1Q8IYX7 474 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 TMEM251Q8N6I4 163 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 ZNF383Q8NA42 475 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 OR10V1Q8NGI7 309 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 APH1AQ96BI3 265 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 POM121Q96HA1 1249 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 RNF150Q9ULK6 438 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 KCNS2Q9ULS6 477 aa11.99□□□□□ -0.49
SCFD1-203ENST00000458591 DIDO1Q9BTC0 2240 aaKnown RBP11.99□□□□□ -0.49
SCFD1-203ENST00000458591 DSPP15924 2871 aaKnown RBP11.98□□□□□ -0.49
SCFD1-203ENST00000458591 DEGS1O15121 323 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 OR8G1Q15617 311 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 OR1C1Q15619 314 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 ZNF585BQ52M93 769 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 FAM90A2PQ658T7 463 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 STX12Q86Y82 276 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 LINC00470Q9BZP3 86 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 PSENENQ9NZ42 101 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 RBM7Q9Y580 266 aaKnown RBP11.98□□□□□ -0.49
SCFD1-203ENST00000458591 ANKRD30BLA7E2S9 258 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST1H2BKO60814 126 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 DFFBO76075 338 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 SYNGR4O95473 234 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST1H2BJP06899 126 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST1H2BOP23527 126 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST1H2BBP33778 126 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 CD200P41217 278 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST1H2BDP58876 126 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST1H2BCP62807 126 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 SRSF7Q16629 238 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST2H2BEQ16778 126 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.98□□□□□ -0.49
SCFD1-203ENST00000458591 Q6P435 159 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 OR10G4Q8NGN3 311 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST1H2BHQ93079 126 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST1H2BNQ99877 126 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 HIST1H2BMQ99879 126 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 FAM173AQ9BQD7 235 aa11.98□□□□□ -0.49
SCFD1-203ENST00000458591 TNRC6BQ9UPQ9 1833 aaKnown RBP11.98□□□□□ -0.49
SCFD1-203ENST00000458591 C9orf172C9J069 976 aa11.97□□□□□ -0.49
SCFD1-203ENST00000458591 TGOLN2O43493 480 aa11.97□□□□□ -0.49
SCFD1-203ENST00000458591 IFNA5P01569 189 aa11.97□□□□□ -0.49
SCFD1-203ENST00000458591 IGHEP01854 428 aa11.97□□□□□ -0.49
SCFD1-203ENST00000458591 CD55P08174 381 aa11.97□□□□□ -0.49
SCFD1-203ENST00000458591 LINC00205P59089 165 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms