RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 SMR3AQ99954 134 aa7.47□□□□□ -1.21
VPS50-207ENST00000458530 FXYD6Q9H0Q3 95 aa7.47□□□□□ -1.21
VPS50-207ENST00000458530 TMEM106BQ9NUM4 274 aa7.47□□□□□ -1.21
VPS50-207ENST00000458530 MGAT4CQ9UBM8 478 aa7.47□□□□□ -1.21
VPS50-207ENST00000458530 SHPKQ9UHJ6 478 aa7.47□□□□□ -1.21
VPS50-207ENST00000458530 KIF25Q9UIL4 384 aa7.47□□□□□ -1.21
VPS50-207ENST00000458530 KCNIP3Q9Y2W7 256 aa7.47□□□□□ -1.21
VPS50-207ENST00000458530 PPIAL4AQ9Y536 164 aa7.47□□□□□ -1.21
VPS50-207ENST00000458530 ZANQ9Y493 2812 aa7.47□□□□□ -1.21
VPS50-207ENST00000458530 HIVEP2P31629 2446 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 IGHV3OR15-7A0A075B7D8 119 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 TRBV6-7A0A0A0MS04 114 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 TEX13DA0A0J9YY54 714 aaPredicted RBP7.46□□□□□ -1.22
VPS50-207ENST00000458530 LOC100996750A0A140TA64 210 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 ODAMA1E959 279 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 C9orf170A2RU37 121 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 BOLA2-SMG1P6H3BVE0 249 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 SIGLEC5O15389 551 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 ZNF737O75373 536 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 B3GALNT1O75752 331 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 RGS11O94810 467 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 SFT2D2O95562 160 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 HPXP02790 462 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 GIPP09681 153 aaPredicted RBP7.46□□□□□ -1.22
VPS50-207ENST00000458530 SCTP09683 121 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 GZMHP20718 246 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 AADACP22760 399 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 ZBTB25P24278 435 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 P2RX3P56373 397 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 FXYD4P59646 89 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 RAP2BP61225 183 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 SRPXP78539 464 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 MRPS11P82912 194 aaKnown RBP7.46□□□□□ -1.22
VPS50-207ENST00000458530 DHODHQ02127 395 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 PPP1R1AQ13522 171 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 MST1LQ2TV78 715 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 IGSF11Q5DX21 431 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 DTX2Q86UW9 622 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 CMTM1Q8IZ96 169 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 MUC20Q8N307 709 aaPredicted RBP7.46□□□□□ -1.22
VPS50-207ENST00000458530 OR2AK2Q8NG84 335 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 MITD1Q8WV92 249 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 CAPSLQ8WWF8 208 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 IL1F10Q8WWZ1 152 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 MRGPRFQ96AM1 343 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 TIMD4Q96H15 378 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 ST6GAL2Q96JF0 529 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 SUCNR1Q9BXA5 334 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 ZNF436Q9C0F3 470 aaPredicted RBP7.46□□□□□ -1.22
VPS50-207ENST00000458530 C5orf66Q9H5L9 145 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 RANBP3Q9H6Z4 567 aaPredicted RBP7.46□□□□□ -1.22
VPS50-207ENST00000458530 TAF9BQ9HBM6 251 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 RANGRFQ9HD47 186 aaPredicted RBP7.46□□□□□ -1.22
VPS50-207ENST00000458530 OR2W1Q9Y3N9 320 aa7.46□□□□□ -1.22
VPS50-207ENST00000458530 ROS1P08922 2347 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 TRGV10A0A0A0MS01 117 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 A6NNC1 897 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 GPR31O00270 319 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 TUSC2O75896 110 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 SLC22A5O76082 557 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 IFNA2P01563 188 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 C1QBP02746 253 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 HEXAP06865 529 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 RCC1P18754 421 aaPredicted RBP7.45□□□□□ -1.22
VPS50-207ENST00000458530 NFYAP23511 347 aaPredicted RBP7.45□□□□□ -1.22
VPS50-207ENST00000458530 LUMP51884 338 aaPredicted RBP7.45□□□□□ -1.22
VPS50-207ENST00000458530 EDDM3BP56851 147 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 PIGPP57054 158 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 RND3P61587 244 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 CYCSP99999 105 aaKnown RBP7.45□□□□□ -1.22
VPS50-207ENST00000458530 AESQ08117 197 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 BAMBIQ13145 260 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 EDDM3AQ14507 147 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 MSMO1Q15800 293 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 C11orf91Q3C1V1 193 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 SPRNQ5BIV9 151 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 LRRC10Q5BKY1 277 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 C20orf204Q6ZNR8 217 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 ZNF788Q6ZQV5 615 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 H1FOOQ8IZA3 346 aaPredicted RBP7.45□□□□□ -1.22
VPS50-207ENST00000458530 UXS1Q8NBZ7 420 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 WFDC11Q8NEX6 87 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 OR11H7Q8NGC8 314 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 OR52B4Q8NGK2 314 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 CASTOR1Q8WTX7 329 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 CCL17Q92583 94 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 COQ2Q96H96 371 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 C18orf12Q96KH6 178 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 GAFA1Q96PS6 74 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 RSRP1Q9BUV0 290 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 SLC5A7Q9GZV3 580 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 RBM7Q9Y580 266 aaKnown RBP7.45□□□□□ -1.22
VPS50-207ENST00000458530 DOCK11Q5JSL3 2073 aa7.45□□□□□ -1.22
VPS50-207ENST00000458530 hADV38S2A0JD32 116 aa7.44□□□□□ -1.22
VPS50-207ENST00000458530 CRYM-AS1A6NIL9 109 aa7.44□□□□□ -1.22
VPS50-207ENST00000458530 RNF212BA8MTL3 300 aa7.44□□□□□ -1.22
VPS50-207ENST00000458530 A8MV72 311 aaPredicted RBP7.44□□□□□ -1.22
VPS50-207ENST00000458530 GOSR2O14653 212 aa7.44□□□□□ -1.22
VPS50-207ENST00000458530 NDUFB3O43676 98 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms