RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 CRYM-AS1A6NIL9 109 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 LINC00614P0C842 121 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 TMEM225BP0DP42 221 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 EPHA1P21709 976 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 GNB2P62879 340 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 ZNF506Q5JVG8 444 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-213ENST00000457179 URM1Q9BTM9 101 aaKnown RBP11.67□□□□□ -0.54
TOP3B-213ENST00000457179 FKBP11Q9NYL4 201 aa11.67□□□□□ -0.54
TOP3B-213ENST00000457179 SHANK1Q9Y566 2161 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 IGLV3-32A0A0A0MS00 114 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 FGF8P55075 233 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-213ENST00000457179 FOXG1P55316 489 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-213ENST00000457179 SLC25A53Q5H9E4 307 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 ZIC4Q8N9L1 334 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 OR5C1Q8NGR4 320 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 RTN4IP1Q8WWV3 396 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-213ENST00000457179 C1orf147Q96MC9 270 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-213ENST00000457179 PKDREJQ9NTG1 2253 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 PPP5D1E7EU14 171 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 SPRY1O43609 319 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-213ENST00000457179 OPN1MWP04001 364 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 OPN1MW2P0DN77 364 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 OPN1MW3P0DN78 364 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 OPRM1P35372 400 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 ZNF266Q14584 549 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 SNAI3Q3KNW1 292 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 RTL6Q6ICC9 239 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 LCN15Q6UWW0 184 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 C6orf201Q7Z4U5 140 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 OR2C3Q8N628 320 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 TMEM171Q8WVE6 324 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 SDSLQ96GA7 329 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 KIAA2026Q5HYC2 2103 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 A0A1B0GUS0 222 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 A0A1W2PR80 420 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 IGSF23A1L1A6 192 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 HSPA12AO43301 675 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 SSSCA1O60232 199 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 SRD5A2P31213 254 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 RAC3P60763 192 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 TUSC5Q8IXB3 177 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 LGI3Q8N145 548 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 FBXL14Q8N1E6 418 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 DYRK2Q92630 601 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 ZNF665Q9H7R5 613 aa11.66□□□□□ -0.54
TOP3B-213ENST00000457179 TRBV24-1A0A075B6N3 115 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 NPIPB13A6NJU9 1138 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 ZNF850A8MQ14 1090 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 B4DEV8 164 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 NPIPB4C9JG80 1138 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 M0R135 149 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 MRPL33O75394 65 aaKnown RBP11.65□□□□□ -0.54
TOP3B-213ENST00000457179 WISP2O76076 250 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 DUSP1P28562 367 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 TNFSF10P50591 281 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 RND2P52198 227 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 RRADP55042 308 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 CST9LP1Q5W188 147 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 FAM90A2PQ658T7 463 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 DOK3Q7L591 496 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 ZNF573Q86YE8 665 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 GCNT2Q8N0V5 402 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 OR2M7Q8NG81 312 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 FGFBP3Q8TAT2 258 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 ZNF799Q96GE5 643 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 BOD1Q96IK1 185 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 ANAPC10Q9UM13 185 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 BOKQ9UMX3 212 aaPredicted RBP11.65□□□□□ -0.54
TOP3B-213ENST00000457179 EXPH5Q8NEV8 1989 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 TMEM210A6NLX4 147 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 HPRT1P00492 218 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 ZNF32P17041 273 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 GAGE1Q13065 139 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 SLC25A24Q6NUK1 477 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 GJC3Q8NFK1 279 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 OR11L1Q8NGX0 322 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 OR2V1Q8NHB1 315 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 TBX15Q96SF7 602 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 SPOCK3Q9BQ16 436 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 SRD5A3Q9H8P0 318 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 DNAJC4Q9NNZ3 241 aa11.65□□□□□ -0.54
TOP3B-213ENST00000457179 PHF1O43189 567 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-213ENST00000457179 IGHEP01854 428 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 HLA-HP01893 362 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 CTSDP07339 412 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-213ENST00000457179 FTH1P19P0C7X4 201 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 CEACAM1P13688 526 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 MRPS34P82930 218 aaKnown RBP11.64□□□□□ -0.55
TOP3B-213ENST00000457179 RTP5Q14D33 572 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 C1orf194Q5T5A4 169 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 C16orf82Q7Z2V1 217 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 GGNQ86UU5 652 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 RNF138Q8WVD3 245 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 ABI3Q9P2A4 366 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 VAX2Q9UIW0 290 aa11.64□□□□□ -0.55
TOP3B-213ENST00000457179 MCTS1Q9ULC4 181 aaKnown RBP11.64□□□□□ -0.55
TOP3B-213ENST00000457179 COL5A1P20908 1838 aaPredicted RBP11.64□□□□□ -0.55
TOP3B-213ENST00000457179 ZNF883P0CG24 379 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms