RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 OR4D10Q8NGI6 311 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 OR4C16Q8NGL9 310 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 TINAGL1Q9GZM7 467 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 METTL8Q9H825 291 aaKnown RBP13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 PALMDQ9NP74 551 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 OR2S2Q9NQN1 319 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 HIF1ANQ9NWT6 349 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 GFOD1Q9NXC2 390 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 EHFQ9NZC4 300 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 OR1A1Q9P1Q5 309 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 SLC23A1Q9UHI7 598 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 SESN1Q9Y6P5 492 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 CSPG4Q6UVK1 2322 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 SVEP1Q4LDE5 3571 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 ACANP16112 2415 aa13.59□□□□□ -0.23
CCDC90B-202ENST00000455220 SDCBPO00560 298 aaPredicted RBP13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 BET1O15155 118 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 PRTN3P24158 256 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 ZBTB25P24278 435 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 LY6G6FQ5SQ64 297 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 METTL11BQ5VVY1 283 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 DCAF12L2Q5VW00 463 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 ZNF660Q6AZW8 331 aaPredicted RBP13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 CYB5R2Q6BCY4 276 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 GLCCI1Q86VQ1 547 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 OR52L2PQ8NGH6 319 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 OR10J5Q8NHC4 309 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 C7orf50Q9BRJ6 194 aaKnown RBP13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 HRASLSQ9HDD0 168 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 CELSR1Q9NYQ6 3014 aa13.58□□□□□ -0.23
CCDC90B-202ENST00000455220 IGHV3-43A0A0B4J1X8 118 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 SMAD7O15105 426 aaKnown RBP13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 PLA2G10O15496 165 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 YPEL1O60688 119 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 TUSC2O75896 110 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 TGFAP01135 160 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 ZNF735P0CB33 412 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 IGHV3-43DP0DP04 118 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 FAUP35544 74 aaKnown RBP13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 GNMTQ14749 295 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 LTC4SQ16873 150 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 FAM53AQ6NSI3 398 aaPredicted RBP13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 C16orf87Q6PH81 154 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 DHRS11Q6UWP2 260 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 H1FOOQ8IZA3 346 aaPredicted RBP13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 ARRDC1Q8N5I2 433 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 TNFRSF14Q92956 283 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 YPEL2Q96QA6 119 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 GNG12Q9UBI6 72 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 TBC1D24Q9ULP9 559 aa13.58□□□□□ -0.24
CCDC90B-202ENST00000455220 HSPA12AO43301 675 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 ZNF16P17020 682 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 NFYBP25208 207 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 CD34P28906 385 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 PPP1CCP36873 323 aaKnown RBP13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 Q3ZCU0 254 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 MORN2Q502X0 79 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 UTF1Q5T230 341 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 FAAP20Q6NZ36 180 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 ZNF782Q6ZMW2 699 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 GIMAP1Q8WWP7 306 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 SLC6A7Q99884 636 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 GINS4Q9BRT9 223 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 TMEM133Q9H2Q1 129 aa13.57□□□□□ -0.24
CCDC90B-202ENST00000455220 J3QLI3 93 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 RGS11O94810 467 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 TOX4O94842 621 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 CEACAM6P40199 344 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 KRTAP1-1Q07627 177 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 ASAH1Q13510 395 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 DCTN2Q13561 401 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 VMO1Q7Z5L0 202 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 OR10V1Q8NGI7 309 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 OR56B4Q8NH76 319 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 TBX15Q96SF7 602 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 SUCNR1Q9BXA5 334 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 SIRT7Q9NRC8 400 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 SLC2A8Q9NY64 477 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 RDH8Q9NYR8 311 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 ZNF69Q9UC07 566 aa13.56□□□□□ -0.24
CCDC90B-202ENST00000455220 LINC00854A0A1B0GVQ3 168 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 NAP1L6A6NFF2 107 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 DISC1C4P0D8 188 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 ITGB1BP1O14713 200 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 LYRM1O43325 122 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 AMY2AP04746 511 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 IFNA6P05013 189 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 NFYAP23511 347 aaPredicted RBP13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 FCGR2CP31995 323 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 DLX1P56177 255 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 HCP5Q6MZN7 132 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 LHFPL1Q86WI0 220 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 C8orf31Q8N9H6 132 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 ZNF439Q8NDP4 499 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 FAM216AQ8WUB2 273 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 C18orf12Q96KH6 178 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 TMPRSS13Q9BYE2 586 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 PARP12Q9H0J9 701 aaKnown RBP13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 AUP1Q9Y679 476 aa13.55□□□□□ -0.24
CCDC90B-202ENST00000455220 TLN2Q9Y4G6 2542 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms