RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 AQP10Q96PS8 301 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 OR2D2Q9H210 308 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 GNG12Q9UBI6 72 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 MSRB2Q9Y3D2 182 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 WIPI2Q9Y4P8 454 aa11.5□□□□□ -0.57
CLK3-203ENST00000454830 C12orf77C9JDV5 145 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 HBZP02008 142 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 TMPRSS3P57727 454 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 TNFAIP6P98066 277 aaPredicted RBP11.49□□□□□ -0.57
CLK3-203ENST00000454830 CXorf66Q5JRM2 361 aaPredicted RBP11.49□□□□□ -0.57
CLK3-203ENST00000454830 ADAM5Q6NVV9 412 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 ZCCHC24Q8N2G6 241 aaKnown RBP11.49□□□□□ -0.57
CLK3-203ENST00000454830 TMEM217Q8N7C4 229 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 H3BP45 60 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 CD80P33681 288 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 CCL8P80075 99 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 HSD17B11Q8NBQ5 300 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 ZNRF1Q8ND25 227 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 SPENQ96T58 3664 aaKnown RBP11.49□□□□□ -0.57
CLK3-203ENST00000454830 FAM24AA6NFZ4 105 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 TNFSF4P23510 183 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 SRSF7Q16629 238 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLK3-203ENST00000454830 BTNL3Q6UXE8 466 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 HRH4Q9H3N8 390 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 ZFP57Q9NU63 452 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 TUBD1Q9UJT1 453 aa11.49□□□□□ -0.57
CLK3-203ENST00000454830 AGPAT2O15120 278 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 SWI5Q1ZZU3 235 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 EIF5AL1Q6IS14 154 aaKnown RBP11.48□□□□□ -0.57
CLK3-203ENST00000454830 PPP1R35Q8TAP8 253 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 TMEM171Q8WVE6 324 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 RND1Q92730 232 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 ERGIC1Q969X5 290 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 MEGF10Q96KG7 1140 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 FAM234AQ9H0X4 552 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 ARHGDIBP52566 201 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 CASP6P55212 293 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 NHLH2Q02577 135 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 OR1S2Q8NGQ3 325 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 OR13A1Q8NGR1 328 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
CLK3-203ENST00000454830 PLEKHF2Q9H8W4 249 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 PLEKHA2Q9HB19 425 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 OOEPA6NGQ2 149 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 PRH1P02810 166 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 IRF2P14316 349 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 VDAC1P21796 283 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 IL15RAQ13261 267 aa11.48□□□□□ -0.57
CLK3-203ENST00000454830 TRBV6-6A0A0A6YYG2 114 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 BORCS7-ASMTA0A0B4J1R7 106 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 A0A1B0GV50 99 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 SPINT2O43291 252 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 MED6O75586 246 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 CST7O76096 145 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 APOC3P02656 99 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 TDGF1P3P51864 188 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 SLC25A24Q6NUK1 477 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 MRGPRGQ86SM5 289 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 C1orf174Q8IYL3 243 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 RNF141Q8WVD5 230 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 BSCL2Q96G97 398 aaPredicted RBP11.47□□□□□ -0.57
CLK3-203ENST00000454830 COQ2Q96H96 371 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 LINC00052Q96N35 136 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 IFT22Q9H7X7 185 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 PSG11Q9UQ72 335 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 FAM90A27PA6NNH2 459 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 SIGLEC5O15389 551 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 HEXAP06865 529 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 ZNF816Q0VGE8 651 aaPredicted RBP11.47□□□□□ -0.57
CLK3-203ENST00000454830 TESK1Q15569 626 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 CD177Q8N6Q3 437 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 ANGPTL6Q8NI99 470 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 PHYHIPLQ96FC7 376 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 CYB5R3P00387 301 aaPredicted RBP11.47□□□□□ -0.57
CLK3-203ENST00000454830 KCNJ3P48549 501 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 LRTM2Q8N967 370 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 TCTEX1D2Q8WW35 142 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 ABHD14BQ96IU4 210 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 CABLES2Q9BTV7 478 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 CYTL1Q9NRR1 136 aa11.47□□□□□ -0.57
CLK3-203ENST00000454830 H0Y980 276 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 CDS2O95674 445 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 SELLP14151 372 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 UCP1P25874 307 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 BSPH1Q075Z2 132 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 DRAM1Q8N682 238 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 FAM169BQ8N8A8 192 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 PIGMQ9H3S5 423 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 TAAR5O14804 337 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 ST8SIA5O15466 376 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 CCKARP32238 428 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 RND3P61587 244 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 DEFA5Q01523 94 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 ZNF880Q6PDB4 577 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 GCSAMQ8N6F7 178 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 CACNG5Q9UF02 275 aa11.46□□□□□ -0.57
CLK3-203ENST00000454830 KRASP01116 189 aa11.46□□□□□ -0.58
CLK3-203ENST00000454830 SLC35E4Q6ICL7 350 aa11.46□□□□□ -0.58
CLK3-203ENST00000454830 LILRB1Q8NHL6 650 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms