RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CTXN2P0C2S0 81 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 IGHV1-8P0DP01 117 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 IGHV4-38-2P0DP08 117 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 RCC1P18754 421 aaPredicted RBP10.66□□□□□ -0.7
VPS33A-202ENST00000451053 HNF1AP20823 631 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 OMGP23515 440 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 PRTN3P24158 256 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 HLA-DMAP28067 261 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 HLA-DRB3P79483 266 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 HCP5Q6MZN7 132 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 C5orf24Q7Z6I8 188 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 LURAP1LQ8IV03 231 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 PDZD9Q8IXQ8 264 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF565Q8N9K5 539 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 OR5AP2Q8NGF4 316 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 RFESDQ8TAC1 157 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 UBALD1Q8TB05 177 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 SNAPC3Q92966 411 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 LHX4Q969G2 390 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 GAL3ST2Q9H3Q3 398 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 UNKLQ9H9P5 680 aaKnown RBP10.66□□□□□ -0.7
VPS33A-202ENST00000451053 MBNL3Q9NUK0 354 aaKnown RBP10.66□□□□□ -0.7
VPS33A-202ENST00000451053 ZNF230Q9UIE0 474 aaPredicted RBP10.66□□□□□ -0.7
VPS33A-202ENST00000451053 TBC1D24Q9ULP9 559 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 WNK2Q9Y3S1 2297 aa10.66□□□□□ -0.7
VPS33A-202ENST00000451053 CENPVL3A0A0U1RRI6 287 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 hCG_1809904A0A1W2PP81 198 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 A0A1W2PPE2 198 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 A0A1W2PR64 198 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 A0A1W2PRV1 198 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 C12orf77C9JDV5 145 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 RNASEK-C17orf49H0YIS7 233 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 C15orf65H3BRN8 121 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 PLA2G10O15496 165 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 FABP7O15540 132 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 DIRAS3O95661 229 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 CD3DP04234 171 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 GZMHP20718 246 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 HRH1P35367 487 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 SRP14P37108 136 aaKnown RBP10.65□□□□□ -0.7
VPS33A-202ENST00000451053 CDK10Q15131 360 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 VAX1Q5SQQ9 334 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 UTF1Q5T230 341 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 OR52W1Q6IF63 320 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 HEPN1Q6WQI6 88 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 TMEM17Q86X19 198 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 ARRDC1Q8N5I2 433 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 MINDY2Q8NBR6 621 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 OR4C16Q8NGL9 310 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 OR4A4PQ8NGN8 299 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 NANPQ8TBE9 248 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 MAFIPQ8WZ33 124 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 BEX2Q9BXY8 128 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 HRASLSQ9HDD0 168 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 NECAP2Q9NVZ3 263 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 CDC42EP3Q9UKI2 254 aa10.65□□□□□ -0.7
VPS33A-202ENST00000451053 A0A1W2PRD5 423 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 A0A1W2PRF3 423 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 A0A1W2PRM7 423 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 FAM172BPA6NC97 362 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 NPIPB11E5RHQ5 1161 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 SPINT2O43291 252 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 FCER2P06734 321 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 COX7A1P24310 79 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 HMGN3Q15651 99 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 LTC4SQ16873 150 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 TMEM30BQ3MIR4 351 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 RUSC1-AS1Q66K80 236 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 PNKDQ8N490 385 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 OR1L1Q8NH94 360 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 ENKURQ8TC29 256 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 ARL11Q969Q4 196 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 KIRREL1Q96J84 757 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 PRRT1Q99946 306 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 SUCNR1Q9BXA5 334 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 C11orf54Q9H0W9 315 aaPredicted RBP10.64□□□□□ -0.71
VPS33A-202ENST00000451053 LINC00574Q9H8X3 128 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 TAF9BQ9HBM6 251 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 MCUBQ9NWR8 336 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 IDI2-AS1Q9NZ38 188 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 EHFQ9NZC4 300 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 COPZ2Q9P299 210 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 SCP2D1Q9UJQ7 156 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 SESN1Q9Y6P5 492 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 TLN2Q9Y4G6 2542 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 KIAA2026Q5HYC2 2103 aa10.64□□□□□ -0.71
VPS33A-202ENST00000451053 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 FAM240BA0A1B0GVZ2 78 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 M0QYG6 137 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 CRLF1O75462 422 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 HBZP02008 142 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 PMP2P02689 132 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 AMY2AP04746 511 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 TSPAN5P62079 268 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 GPR157Q5UAW9 335 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 NCR3LG1Q68D85 454 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 FAM53AQ6NSI3 398 aaPredicted RBP10.63□□□□□ -0.71
VPS33A-202ENST00000451053 BRD3OSQ6XYD6 125 aa10.63□□□□□ -0.71
VPS33A-202ENST00000451053 OVCH2Q7RTZ1 564 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms