RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ATP5G3P48201 142 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 REG1BP48304 166 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 FUT6P51993 359 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ERVK11-1P61568 191 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 MRPS11P82912 194 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 ATP5G2Q06055 141 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ABHD17CQ6PCB6 329 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 LINC00346Q8IVM7 164 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PIANPQ8IYJ0 282 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 CA13Q8N1Q1 262 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OSR2Q8N2R0 312 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 TTC9CQ8N5M4 171 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR2Z1Q8NG97 314 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR1K1Q8NGR3 316 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR1B1Q8NGR6 318 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 MVB12AQ96EY5 273 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 LRRC61Q9BV99 259 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 BCAS3Q9H6U6 928 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ALKBH4Q9NXW9 302 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 FBLN5Q9UBX5 448 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 MCTS1Q9ULC4 181 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 DAPP1Q9UN19 280 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PXMP4Q9Y6I8 212 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ZNF638Q14966 1978 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 KBTBD11-OT1A0A1B0GTJ5 212 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR4C45A6NMZ5 311 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 A8MWL6 223 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 H3BUT2 72 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 KIR2DS3K7RE56 304 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SYNGR1O43759 233 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 DHRS3O75911 302 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ONECUT2O95948 504 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SP1P08047 785 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PF4V1P10720 104 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 DRD1P21728 446 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ADMP35318 185 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OPRK1P41145 380 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SOX8P57073 446 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 RPS4XP62701 263 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 RAE1P78406 368 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 SLAQ13239 276 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PDGFRLQ15198 375 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 MMDQ15546 238 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR1C1Q15619 314 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 TAL2Q16559 108 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 WDR38Q5JTN6 314 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 LY6G6FQ5SQ64 297 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 FAM27D1Q5T7N8 215 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 FIGLAQ6QHK4 219 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SPRED2Q7Z698 418 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 CALHM1Q8IU99 346 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ATOH7Q8N100 152 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 MUC15Q8N387 334 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 FAM89BQ8N5H3 189 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR1L1Q8NH94 360 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ZNF480Q8WV37 535 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 EDARADDQ8WWZ3 215 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 OR5P3Q8WZ94 311 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 APOBEC3DQ96AK3 386 aaPredicted RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 MRPL32Q9BYC8 188 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 DUSP15Q9H1R2 295 aaPredicted RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 MS4A5Q9H3V2 200 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ZNF703Q9H7S9 590 aaPredicted RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 CYTL1Q9NRR1 136 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 AP5S1Q9NUS5 200 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 KLHDC2Q9Y2U9 406 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 INSL5Q9Y5Q6 135 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PRSS21Q9Y6M0 314 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 A0A0A6YYD5 115 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 GAGE12HA6NDE8 117 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 A8MWV9 139 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 E9PQ18 207 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 COX7A2P2O60397 106 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PAGE4O60829 102 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ALOX12BO75342 701 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 TUSC2O75896 110 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 NDUFC2O95298 119 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 IGLV3-25P01717 112 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 P01737 135 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 NGFRP08138 427 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 CXCL1P09341 107 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 IFITM1P13164 125 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 AREGP15514 252 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ZNF708P17019 499 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 MST1P26927 711 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 SRIP30626 198 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 PPP1CCP36873 323 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 APOBEC1P41238 236 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 ASIPP42127 132 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 CTSOP43234 321 aaPredicted RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 FOXL2P58012 376 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 RPS15P62841 145 aaKnown RBP1.93□□□□□ -2.1
USP53-202ENST00000450251 PSG6Q00889 435 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 FUT5Q11128 374 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ZP4Q12836 540 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 TBC1D28Q2M2D7 210 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 DUSP28Q4G0W2 176 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 ZNF542PQ5EBM4 170 aa1.93□□□□□ -2.1
USP53-202ENST00000450251 LAIR1Q6GTX8 287 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms