RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 DCLRE1BQ9H816 532 aa17.36■□□□□ 0.37
CPSF7-208ENST00000450000 ABRACLQ9P1F3 81 aa17.36■□□□□ 0.37
CPSF7-208ENST00000450000 LRRC42Q9Y546 428 aa17.36■□□□□ 0.37
CPSF7-208ENST00000450000 TGP01266 2768 aa17.35■□□□□ 0.37
CPSF7-208ENST00000450000 SLC31A2O15432 143 aa17.35■□□□□ 0.37
CPSF7-208ENST00000450000 SPHARQ15513 63 aa17.35■□□□□ 0.37
CPSF7-208ENST00000450000 HSD17B12Q53GQ0 312 aa17.35■□□□□ 0.37
CPSF7-208ENST00000450000 STEAP3Q658P3 488 aa17.35■□□□□ 0.37
CPSF7-208ENST00000450000 FAM53AQ6NSI3 398 aaPredicted RBP17.35■□□□□ 0.37
CPSF7-208ENST00000450000 OR2W3Q7Z3T1 314 aa17.35■□□□□ 0.37
CPSF7-208ENST00000450000 CEACAM19Q7Z692 300 aa17.35■□□□□ 0.37
CPSF7-208ENST00000450000 KLHL30-AS1Q8NEE0 82 aa17.35■□□□□ 0.37
CPSF7-208ENST00000450000 MCRIP2Q9BUT9 160 aaKnown RBP17.35■□□□□ 0.37
CPSF7-208ENST00000450000 ABCG5Q9H222 651 aa17.35■□□□□ 0.37
CPSF7-208ENST00000450000 CHMP1AQ9HD42 196 aaPredicted RBP17.35■□□□□ 0.37
CPSF7-208ENST00000450000 FKBP14Q9NWM8 211 aa17.35■□□□□ 0.37
CPSF7-208ENST00000450000 SC5DO75845 299 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 GPR12P47775 334 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 PNLIPRP3Q17RR3 467 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 CT45A1Q5HYN5 189 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 CXorf66Q5JRM2 361 aaPredicted RBP17.34■□□□□ 0.37
CPSF7-208ENST00000450000 C6orf141Q5SZD1 244 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 RNLSQ5VYX0 342 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 ZNF554Q86TJ5 538 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 CT45A3Q8NHU0 189 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 PHYHIPQ92561 330 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 UFD1Q92890 307 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 ST6GALNAC6Q969X2 333 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 GALMQ96C23 342 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 S1PR3Q99500 378 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 TMEM59Q9BXS4 323 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 JPT1Q9UK76 154 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 TPRKBQ9Y3C4 175 aa17.34■□□□□ 0.37
CPSF7-208ENST00000450000 ANKRD65E5RJM6 399 aa17.33■□□□□ 0.36
CPSF7-208ENST00000450000 VDAC1P21796 283 aa17.33■□□□□ 0.36
CPSF7-208ENST00000450000 SOX6P35712 828 aa17.33■□□□□ 0.36
CPSF7-208ENST00000450000 C8orf86Q6ZUL3 223 aa17.33■□□□□ 0.36
CPSF7-208ENST00000450000 ZNF695Q8IW36 515 aa17.33■□□□□ 0.36
CPSF7-208ENST00000450000 GAPTQ8N292 157 aa17.33■□□□□ 0.36
CPSF7-208ENST00000450000 KCNG3Q8TAE7 436 aa17.33■□□□□ 0.36
CPSF7-208ENST00000450000 SETD6Q8TBK2 473 aa17.33■□□□□ 0.36
CPSF7-208ENST00000450000 ABHD14AQ9BUJ0 271 aa17.33■□□□□ 0.36
CPSF7-208ENST00000450000 NOTCH3Q9UM47 2321 aa17.33■□□□□ 0.36
CPSF7-208ENST00000450000 HSMCR30P0CW71 290 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 SRMP19623 302 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 HTR2CP28335 458 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 MYCNOSP40205 109 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 THBS3P49746 956 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 ZNF134P52741 427 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 ZNF137PP52743 207 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 RAB25P57735 213 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 INSL4Q14641 139 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 MORN2Q502X0 79 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 DEFB121Q5J5C9 76 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 UNQ9370/PRO34162Q6UXP9 181 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 MRPL41Q8IXM3 137 aaKnown RBP17.32■□□□□ 0.36
CPSF7-208ENST00000450000 Q8N6K4 173 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 LINC00482Q8N8I6 264 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 Q8N9W7 124 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 ZNF439Q8NDP4 499 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 OR52L2PQ8NGH6 319 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 MBNL3Q9NUK0 354 aaKnown RBP17.32■□□□□ 0.36
CPSF7-208ENST00000450000 STEAP1Q9UHE8 339 aa17.32■□□□□ 0.36
CPSF7-208ENST00000450000 ZNF736B4DX44 427 aaPredicted RBP17.31■□□□□ 0.36
CPSF7-208ENST00000450000 LANCL1O43813 399 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 MMDQ15546 238 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 FAM27D1Q5T7N8 215 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 SIGIRRQ6IA17 410 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 OR10K2Q6IF99 312 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 LYPD6Q86Y78 171 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 OR2AK2Q8NG84 335 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 MRPL30Q8TCC3 161 aaKnown RBP17.31■□□□□ 0.36
CPSF7-208ENST00000450000 IL1F10Q8WWZ1 152 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 CCDC90BQ9GZT6 254 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 PLGRKTQ9HBL7 147 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 PLEKHJ1Q9NW61 149 aa17.31■□□□□ 0.36
CPSF7-208ENST00000450000 ZMAT5Q9UDW3 170 aaKnown RBP17.31■□□□□ 0.36
CPSF7-208ENST00000450000 PRKDCP78527 4128 aaKnown RBP17.31■□□□□ 0.36
CPSF7-208ENST00000450000 LINC01548A6NM66 108 aa17.3■□□□□ 0.36
CPSF7-208ENST00000450000 OR5H8P0DN80 308 aa17.3■□□□□ 0.36
CPSF7-208ENST00000450000 VSIG8P0DPA2 414 aa17.3■□□□□ 0.36
CPSF7-208ENST00000450000 PPP1CCP36873 323 aaKnown RBP17.3■□□□□ 0.36
CPSF7-208ENST00000450000 RPS27AP62979 156 aaKnown RBP17.3■□□□□ 0.36
CPSF7-208ENST00000450000 HTD2P86397 168 aa17.3■□□□□ 0.36
CPSF7-208ENST00000450000 LIPKQ5VXJ0 399 aa17.3■□□□□ 0.36
CPSF7-208ENST00000450000 ZNF251Q9BRH9 671 aa17.3■□□□□ 0.36
CPSF7-208ENST00000450000 URM1Q9BTM9 101 aaKnown RBP17.3■□□□□ 0.36
CPSF7-208ENST00000450000 FAAP24Q9BTP7 215 aa17.3■□□□□ 0.36
CPSF7-208ENST00000450000 YPEL1O60688 119 aa17.29■□□□□ 0.36
CPSF7-208ENST00000450000 MYF6P23409 242 aa17.29■□□□□ 0.36
CPSF7-208ENST00000450000 CHATP28329 748 aa17.29■□□□□ 0.36
CPSF7-208ENST00000450000 BLVRBP30043 206 aaPredicted RBP17.29■□□□□ 0.36
CPSF7-208ENST00000450000 RANBP1P43487 201 aa17.29■□□□□ 0.36
CPSF7-208ENST00000450000 GNMTQ14749 295 aa17.29■□□□□ 0.36
CPSF7-208ENST00000450000 C1orf100Q5SVJ3 147 aa17.29■□□□□ 0.36
CPSF7-208ENST00000450000 C6orf201Q7Z4U5 140 aa17.29■□□□□ 0.36
CPSF7-208ENST00000450000 LRRTM1Q86UE6 522 aa17.29■□□□□ 0.36
CPSF7-208ENST00000450000 OR6M1Q8NGM8 313 aa17.29■□□□□ 0.36
CPSF7-208ENST00000450000 TMEM203Q969S6 136 aa17.29■□□□□ 0.36
CPSF7-208ENST00000450000 YPEL2Q96QA6 119 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms