RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 BLACEA4D250 179 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 MPPED1O15442 326 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 MLNRO43193 412 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 TRAPPC6AO75865 159 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 CLPSP04118 112 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 JMJD7P0C870 316 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 RTP5Q14D33 572 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 PLPPR5Q32ZL2 321 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 ZNF695Q8IW36 515 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 ZNF321PQ8N8H1 164 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 C16orf52Q8NHV5 167 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 GMPPAQ96IJ6 420 aaPredicted RBP16.48■□□□□ 0.23
HMGA1-205ENST00000447654 SIGLEC12Q96PQ1 595 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 NPIPB7O75200 414 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 ARR3P36575 388 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 FAM78BQ5VT40 261 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 LRP11Q86VZ4 500 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 CYYR1Q96J86 154 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 CCDC74BQ96LY2 380 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 PATZ1Q9HBE1 687 aaKnown RBP16.48■□□□□ 0.23
HMGA1-205ENST00000447654 SOHLH2Q9NX45 425 aa16.48■□□□□ 0.23
HMGA1-205ENST00000447654 LILRA5A6NI73 299 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 DIRC3C9JPN6 131 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 IL33O95760 270 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 TMEM50AO95807 157 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 REG1AP05451 166 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 ADMP35318 185 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 DAP3P51398 398 aaKnown RBP16.47■□□□□ 0.23
HMGA1-205ENST00000447654 CLEC12BQ2HXU8 276 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 C6orf201Q7Z4U5 140 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 ABHD12BQ7Z5M8 362 aaPredicted RBP16.47■□□□□ 0.23
HMGA1-205ENST00000447654 Q8N976 141 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.47■□□□□ 0.23
HMGA1-205ENST00000447654 STARD4Q96DR4 205 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 TP53TG3Q9ULZ0 132 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 CEP192Q8TEP8 1941 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 NPIPA2E9PIF3 369 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 NRASP01111 189 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 KRASP01116 189 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 ZNF17P17021 662 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 FGF8P55075 233 aaPredicted RBP16.47■□□□□ 0.23
HMGA1-205ENST00000447654 CFHR1Q03591 330 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 FUT7Q11130 342 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 ZP4Q12836 540 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 CXorf66Q5JRM2 361 aaPredicted RBP16.47■□□□□ 0.23
HMGA1-205ENST00000447654 MEX3BQ6ZN04 569 aaKnown RBP16.47■□□□□ 0.23
HMGA1-205ENST00000447654 PLPPR1Q8TBJ4 325 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 ASB10Q8WXI3 467 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 RAB40CQ96S21 281 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 TUBG2Q9NRH3 451 aa16.47■□□□□ 0.23
HMGA1-205ENST00000447654 IGKV1-9A0A0C4DH69 117 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 H3BMH7 237 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 CRISP2P16562 243 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 VDAC1P21796 283 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 LINC00310P59036 64 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 FXYD4P59646 89 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 HERV-K104P61576 105 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 NMSQ5H8A3 153 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 SELENOHQ8IZQ5 122 aaKnown RBP16.46■□□□□ 0.23
HMGA1-205ENST00000447654 SUMF1Q8NBK3 374 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 LHX4Q969G2 390 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 Q96M66 194 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 DGAT2Q96PD7 388 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 KCNK17Q96T54 332 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 ELOVL5Q9NYP7 299 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 PPIAL4AQ9Y536 164 aa16.46■□□□□ 0.23
HMGA1-205ENST00000447654 IGHV2-26A0A0B4J1V2 119 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 OR5B21A6NL26 309 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 LMO7DNF2Z398 122 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 TMPRSS2O15393 492 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 CHST1O43916 411 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 SERF1AO75920 110 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 TSPOP30536 169 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 OR1D4P47884 311 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 PAX9P55771 341 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 OR1D5P58170 312 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 NXPH1P58417 271 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 RNPS1Q15287 305 aaKnown RBP16.45■□□□□ 0.22
HMGA1-205ENST00000447654 VHLLQ6RSH7 139 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 UNQ5815/PRO19632Q6UWF5 114 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 FAM57BQ71RH2 274 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 SIGLECL1Q8N7X8 197 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 SAMD10Q9BYL1 202 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 OR10A5Q9H207 317 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 SLC39A9Q9NUM3 307 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 RBM7Q9Y580 266 aaKnown RBP16.45■□□□□ 0.22
HMGA1-205ENST00000447654 TIMM9Q9Y5J7 89 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 A0A1B0GUS0 222 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 M0QZ24 198 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 LHX2P50458 406 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 CLDN18P56856 261 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 FMODQ06828 376 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 OR8B8Q15620 311 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 COMMD2Q86X83 199 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 ZNF524Q96C55 264 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 GUCD1Q96NT3 240 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 COL25A1Q9BXS0 654 aaPredicted RBP16.45■□□□□ 0.22
HMGA1-205ENST00000447654 ZDHHC11Q9H8X9 412 aa16.45■□□□□ 0.22
HMGA1-205ENST00000447654 UBE2J1Q9Y385 318 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms