RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 CEP192Q8TEP8 1941 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 A0A087WZY1 265 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 TRAV39A0A0B4J263 110 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 SLC22A20A6NK97 555 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 CCNOP22674 350 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 PRSS8Q16651 343 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 S100A7AQ86SG5 101 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 ZNF295-AS1Q8N0V1 137 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 GCNT2Q8N0V5 402 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 RAB24Q969Q5 203 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 WFIKKN1Q96NZ8 548 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 PHF7Q9BWX1 381 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-218ENST00000442625 LRFN1Q9P244 771 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 PRRC2CQ9Y520 2896 aaKnown RBP12.07□□□□□ -0.48
MCF2L-218ENST00000442625 BCL3P20749 454 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 SSR4P51571 173 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 TLE4Q04727 773 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 ARL16Q0P5N6 197 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 CEACAM16Q2WEN9 425 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 NMSQ5H8A3 153 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 C9orf135Q5VTT2 229 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 SLC35E3Q7Z769 313 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 C1orf87Q8N0U7 546 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 OR1K1Q8NGR3 316 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 CABLES2Q9BTV7 478 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 SMDT1Q9H4I9 107 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 IGKV1-6A0A0C4DH72 117 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 GALR2O43603 387 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-218ENST00000442625 METTL15P1P0C7V9 234 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 COX6A1P12074 109 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 ELLP55199 621 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-218ENST00000442625 UCP3P55916 312 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 ID3Q02535 119 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 Q6ZRM9 215 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 TMEM56Q96MV1 263 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 ATP5SQ99766 215 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 PLA2G3Q9NZ20 509 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 TMEM56-RWDD3S4R434 201 aa12.07□□□□□ -0.48
MCF2L-218ENST00000442625 hCG_38984A0A1B0GV85 526 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 SMCO3A2RU48 225 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 CEBPZOSA8MTT3 80 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 ZNF705GA8MUZ8 300 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-218ENST00000442625 CXCL13O43927 109 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 CYC1P08574 325 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 TAS2R30P59541 319 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 EXT1Q16394 746 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 ZNF787Q6DD87 383 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 ASCL4Q6XD76 172 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 AAED1Q7RTV5 226 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 OR4X1Q8NH49 305 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 RNASE8Q8TDE3 154 aaKnown RBP12.06□□□□□ -0.48
MCF2L-218ENST00000442625 GNPNAT1Q96EK6 184 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-218ENST00000442625 RNF115Q9Y4L5 304 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 A0A1B0GU03 582 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 OR6C6A6NF89 314 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 EPHA8P29322 1005 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-218ENST00000442625 ERVS71-1P61550 626 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 RTP5Q14D33 572 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 P2RY6Q15077 328 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 TMEM42Q69YG0 159 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 NUDT11Q96G61 164 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 ZNF488Q96MN9 340 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 R4GN57 208 aa12.06□□□□□ -0.48
MCF2L-218ENST00000442625 CACNA1EQ15878 2313 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 CLDN34H7C241 214 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 TK1P04183 234 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 CST2P09228 141 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 CTXN2P0C2S0 81 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 RFPL3SP0C7P2 107 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 CCL4P13236 92 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 S100A7P31151 101 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 COL10A1Q03692 680 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 ADIRFQ15847 76 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 HLA-BQ31612 363 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 C20orf204Q6ZNR8 217 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 MRGPRDQ8TDS7 321 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 IMMP1LQ96LU5 166 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 FOXB1Q99853 325 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 OR2H1Q9GZK4 316 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 SOX15O60248 233 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 FUT6P51993 359 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 RPS19BP1Q86WX3 136 aaKnown RBP12.05□□□□□ -0.48
MCF2L-218ENST00000442625 GPR146Q96CH1 333 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 RBMXL1Q96E39 390 aaKnown RBP12.05□□□□□ -0.48
MCF2L-218ENST00000442625 ELOVL1Q9BW60 279 aa12.05□□□□□ -0.48
MCF2L-218ENST00000442625 FGF23Q9GZV9 251 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-218ENST00000442625 ELOA3CA0A087WX78 387 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-218ENST00000442625 TRAPPC6AO75865 159 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 AMBPP02760 352 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 GZMBP10144 247 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 BCL2P10415 239 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 PSG2P11465 335 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 VDAC1P21796 283 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 TMEM211Q6ICI0 200 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 ZNF664Q8N3J9 261 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 ABHD3Q8WU67 409 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 SPIN2AQ99865 258 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 SPIN2BQ9BPZ2 258 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 RBKSQ9H477 322 aa12.04□□□□□ -0.48
MCF2L-218ENST00000442625 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms