RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CRYGSP22914 178 aa17.33■□□□□ 0.37
SHOX2-203ENST00000441443 ACTL10Q5JWF8 245 aa17.33■□□□□ 0.37
SHOX2-203ENST00000441443 ZNF525Q8N782 197 aa17.33■□□□□ 0.37
SHOX2-203ENST00000441443 ZNF611Q8N823 705 aa17.33■□□□□ 0.37
SHOX2-203ENST00000441443 OR1K1Q8NGR3 316 aa17.33■□□□□ 0.37
SHOX2-203ENST00000441443 TMEM54Q969K7 222 aa17.33■□□□□ 0.37
SHOX2-203ENST00000441443 OCIAD1Q9NX40 245 aa17.33■□□□□ 0.37
SHOX2-203ENST00000441443 G3V3Y1 287 aa17.33■□□□□ 0.36
SHOX2-203ENST00000441443 PGLYRP1O75594 196 aaPredicted RBP17.33■□□□□ 0.36
SHOX2-203ENST00000441443 CNOT4O95628 575 aaKnown RBP17.33■□□□□ 0.36
SHOX2-203ENST00000441443 HRASP01112 189 aa17.33■□□□□ 0.36
SHOX2-203ENST00000441443 CST2P09228 141 aa17.33■□□□□ 0.36
SHOX2-203ENST00000441443 CD33P20138 364 aa17.33■□□□□ 0.36
SHOX2-203ENST00000441443 CCDC74BQ96LY2 380 aa17.33■□□□□ 0.36
SHOX2-203ENST00000441443 HS3ST6Q96QI5 342 aa17.33■□□□□ 0.36
SHOX2-203ENST00000441443 PARLQ9H300 379 aa17.33■□□□□ 0.36
SHOX2-203ENST00000441443 OR51I2Q9H344 312 aa17.33■□□□□ 0.36
SHOX2-203ENST00000441443 PRDM6Q9NQX0 595 aa17.33■□□□□ 0.36
SHOX2-203ENST00000441443 SLC39A9Q9NUM3 307 aa17.33■□□□□ 0.36
SHOX2-203ENST00000441443 CELA2AP08217 269 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 RAB4AP20338 218 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 HAPLN4Q86UW8 402 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 MYPOPQ86VE0 399 aaPredicted RBP17.32■□□□□ 0.36
SHOX2-203ENST00000441443 IGHV5-10-1A0A0J9YXX1 117 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 IGKV1D-33P01593 117 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 IGKV1-33P01594 117 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 PSG2P11465 335 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 ZNF468Q5VIY5 522 aaPredicted RBP17.32■□□□□ 0.36
SHOX2-203ENST00000441443 TMEM256Q8N2U0 113 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 GBGT1Q8N5D6 347 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 OR5D13Q8NGL4 314 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 OR2T10Q8NGZ9 312 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 NEK7Q8TDX7 302 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 PPP1R14DQ9NXH3 145 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 GOLT1BQ9Y3E0 138 aa17.32■□□□□ 0.36
SHOX2-203ENST00000441443 IGKV1-6A0A0C4DH72 117 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 DUXBA0A1W2PPF3 345 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 KIAA1324LA8MWY0 1029 aaPredicted RBP17.31■□□□□ 0.36
SHOX2-203ENST00000441443 ZNF92Q03936 586 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 C1orf194Q5T5A4 169 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 PSENENQ9NZ42 101 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 SEMA5BQ9P283 1151 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 IL36RNQ9UBH0 155 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 EML6Q6ZMW3 1958 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 PRRC2CQ9Y520 2896 aaKnown RBP17.31■□□□□ 0.36
SHOX2-203ENST00000441443 ZNF705FA8MVS1 300 aaPredicted RBP17.31■□□□□ 0.36
SHOX2-203ENST00000441443 ZNHIT1O43257 154 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 ZNF705DP0CH99 300 aaPredicted RBP17.31■□□□□ 0.36
SHOX2-203ENST00000441443 ZNF705BP0CI00 300 aaPredicted RBP17.31■□□□□ 0.36
SHOX2-203ENST00000441443 CCKARP32238 428 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 TMEM41BQ5BJD5 291 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 KMT5CQ86Y97 462 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 RPP25LQ8N5L8 163 aaKnown RBP17.31■□□□□ 0.36
SHOX2-203ENST00000441443 MRPL30Q8TCC3 161 aaKnown RBP17.31■□□□□ 0.36
SHOX2-203ENST00000441443 ZNF845Q96IR2 970 aaPredicted RBP17.31■□□□□ 0.36
SHOX2-203ENST00000441443 OR6C3Q9NZP0 311 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 CACNG5Q9UF02 275 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 EPHA8P29322 1005 aaPredicted RBP17.31■□□□□ 0.36
SHOX2-203ENST00000441443 FUT6P51993 359 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 HLA-BQ31612 363 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 RNF138Q8WVD3 245 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 R3HDM4Q96D70 268 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 RAB40CQ96S21 281 aa17.31■□□□□ 0.36
SHOX2-203ENST00000441443 LOC102725191A0A1B0GVB3 256 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 H0Y980 276 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 DLEU1O43261 78 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 SYNGR3O43761 229 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 NUPR1O60356 82 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 SERPINE2P07093 398 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 CNN1P51911 297 aaKnown RBP17.3■□□□□ 0.36
SHOX2-203ENST00000441443 OR4F5Q8NH21 305 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 OR4C12Q96R67 309 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 OR4F4Q96R69 305 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 DEFB126Q9BYW3 111 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 SLC25A22Q9H936 323 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 AURKAIP1Q9NWT8 199 aaPredicted RBP17.3■□□□□ 0.36
SHOX2-203ENST00000441443 UBE2L5PA0A1B0GUS4 154 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 PATE3B3GLJ2 98 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 PDGFBP01127 241 aaPredicted RBP17.3■□□□□ 0.36
SHOX2-203ENST00000441443 F2RP25116 425 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 CHRNA7P36544 502 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 LRRC75BQ2VPJ9 315 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 TMEM42Q69YG0 159 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 OR1F12Q8NHA8 337 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 AGMATQ9BSE5 352 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 NAGKQ9UJ70 344 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 RNF150Q9ULK6 438 aa17.3■□□□□ 0.36
SHOX2-203ENST00000441443 TMEM210A6NLX4 147 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 ACOT6Q3I5F7 207 aaPredicted RBP17.29■□□□□ 0.36
SHOX2-203ENST00000441443 SPANXN5Q5MJ07 72 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 CST9LP1Q5W188 147 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 FOXL2NBQ6ZUU3 175 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 RABEPKQ7Z6M1 372 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 CARFQ8N187 725 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 PSMG3Q9BT73 122 aaPredicted RBP17.29■□□□□ 0.36
SHOX2-203ENST00000441443 SYNGR2O43760 224 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 DCAF10Q5QP82 559 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 FAM27BQ5VT28 67 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 SDSLQ96GA7 329 aa17.29■□□□□ 0.36
SHOX2-203ENST00000441443 IL36GQ9NZH8 169 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms